Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02149 ATGGGATCAATTGGGGTACTTCTTGTGGCCCAAGTGATGCCATACCTAGAACAAGAATTGGACAAGCGCTACAACCTCTTCCGAATATGGGATTTCCCCCAAAAGGCTCAGCTTCTCACCGACCACGCCACCTCCATCCGCGCGGTGGTCGGAAACTCGAACGCCGGCGCCGACGTGGAGCTGATCGAGGCGTTGCCGAAGCTGGAGATAGTGTCGAGCTTCAGTGTTGGGGTGGACAAAATTGACTTGAACAAGTGTAAGGAGAAAGGGATTCGTGTGACTAATACCCCTGATGTGTTGACCGATGAGGTTGCTGATTTGGCCATTGGTTTGATCCTCGCACTCTTGAGGAGGATCTGTGAGTGTGATCGATACGTTAGAAGTGGCAAATGGAAGCATGGGGACTTCAAATTGACCACAAAGTTCTCTGGGAAAACTGTTGGCATTATTGGGCTGGGAAGGATTGGGACAGCAATTGCCAAGAGAGCTGAAGGATTTAACTGTCCAATATGTTACTCCTCTAGAACTCAAAAACCAGAGTCAAAATACAAGTATTATCCAAGTGTTGTTGAGCTTGCATCCAACTGCGATATATTAGTTGTTGCTTGTCCTCTTACAGAGGAAACCCATCACGTCATCAACAGGGAGGTCATCAATGCACTGGGTCCCAAGGGTTTTCTAATTAACATTGGGAGAGGTAAGCATGTTGATGAGCCAGAGCTGGTCTCTGCATTGCTTGAAGGTCGTTTGGGTGGAGCTGGGCTAGATGTGTTTGAAAATGAGCCTTATGTTCCTGAAGAGCTATTTGGGCTAGAAAATGTTGTCTTGTTGCCTCATGTTGGAAGCGGCACAATAGAAACAAGAACTGCTATGGCTGACCTTGTCCTTGGAAACCTGGAGGCTCATTTCCTTGGAAAGACACTGTTAACTCCCTTGGTTTAA 942 0.4735 MGSIGVLLVAQVMPYLEQELDKRYNLFRIWDFPQKAQLLTDHATSIRAVVGNSNAGADVELIEALPKLEIVSSFSVGVDKIDLNKCKEKGIRVTNTPDVLTDEVADLAIGLILALLRRICECDRYVRSGKWKHGDFKLTTKFSGKTVGIIGLGRIGTAIAKRAEGFNCPICYSSRTQKPESKYKYYPSVVELASNCDILVVACPLTEETHHVINREVINALGPKGFLINIGRGKHVDEPELVSALLEGRLGGAGLDVFENEPYVPEELFGLENVVLLPHVGSGTIETRTAMADLVLGNLEAHFLGKTLLTPLV* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02149 313 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 281 IPR006140 GO:0051287
Rops4g02149 313 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 6 134 - -
Rops4g02149 313 Gene3D - 101 284 - -
Rops4g02149 313 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 5 308 - -
Rops4g02149 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 282 IPR036291 -
Rops4g02149 313 CDD HPPR 4 303 - -
Rops4g02149 313 Gene3D - 17 306 - -
Rops4g02149 313 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 310 IPR006139 GO:0016616|GO:0051287
Rops4g02149 313 FunFam Putative 2-hydroxyacid dehydrogenase 101 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02149 Rops-Chr4 47963968 47965802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02149 - K18606 mtr:11418154 556.599