Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops4g02148 | ATGGTCCGGGCTCTGGACCAAGAGCAGGAGAGTTACAGGTCCAAACTGTTCCATTTCAAAGGGATGTTTGAGAATACAGGGAGGCATACAAAGAGTTTAAGCATTGAGAGTGCCAGCACGTTAGATCCTCCAGAAGAAGAACCAGCGACATCAAGAAGTCAAGGATCAAAACCTCTAAATGATTCTGAGAGGGCTCCTAATAAGTCAAGGACAATCAAGGAGGAAATAGTAGCCAAAGAAGCCAAAGAGAAGCTATTACAAGAAATGGAACAGATGAAGGAGAGATTTTCTAAATTGCTATTGGGGGAGGACATGTCTGGTGGAGGAAAGGGTGTTTCTTCAGCCTTGGCTTTGTCAAACGCATTCACAAACCTTGCTGCTGCTGTTTTTGGTGAACAAAAGCGCCTAGAGCCAATGCCGGCAGAAAGGAAAGCAAGATGGAGAAAAGAAATTGATTGGCTTCTATCAGTCACCGATTACATTGTTGAAATGGTTCCTTCACAACAAAAATCCAAGGATGGCACAAACATGGAGATTATGACAACACGACAACGAACTGATCTCCACATGAATATCCCTGCCTTGCGGAAGCTTGATACAATGCTTATTGATTGTCTTGACAACTTCAAAGACCAAAATGAGTTCTATTATGTATCAAAAGATTCAGATGATTCAGATAAAGATAGTGCAAAAAGAAAAAATGATGACAAGTGGTGGTTACCTACACCTAAGGTTCCTGCAGAGGGTTTATCTGATGCAGCAAGAAGGTTTGTGCAGTATCAAAAAGATTGTGTGAATCAAGTACTTAAAGCAGCCATGGCCATAAATGCTCAAACTCTATCAGAGATGGAGATCCCTGAAAGCTATATTGAATCCCTACCCAAGAATGGAAGAGCAAGTCTTGGGGACTTGATCTACCGGAATATTACAGATGAATTTTTTGATCCTGATCAGTTCCTAGCGACTGTGGACATGTCATCAGAACATAAAATCCTAGATCTCAAGAACAGAATTGAGGCATCTATAGTGATTTGGAAGCGGAAGATGAACCAAAAAGATTCCAAATCAACTTGGGGTTCTGCTGTTAGTATGGAAAAAAGAGAACTCTTTGAAGAGAGAGCAGAAACCATCTTACTTCTCTTGAAGCACCGTTTTCCAGGACTTCCCCAATCTTCATTGGATATAAGCAAAATCCAATTCAACCGGGATGTGGGGCAAGCAGTTCTTGAAAGCTATTCAAGAATATTGGAAAGTTTGGCTTTTACAGTGCTGTCAAGAATAGACGATGTACTCCATGCAGATCTCCAAACTCAAAATCCATCACAAGCTGGAAGAAGGAGCTGTGTGAGAAACCCCATTCCCAGGCCAGAAAAGTGTCCAACTCCTAAAGAAGAGGTAGACAAAGGTGGTGCAGACACACCTGGTTCAATGACACTATCAGATTTCATGGGTTGGAGCAGTGATCAAGGTGACTCAGACGTCAAGAAGGACCCCCTTGCTGTAACAGATGACTTTTACAAAGACCTTGATAGTGGAAAGCCTCAAAAACTTCCAAATGTAGTAACTGACAAGAAGGTGTCATACCTTGAGACCTTGGGAGGCATGAGAAGTCCAACATCACGCCATTAA | 1629 | 0.4205 | MVRALDQEQESYRSKLFHFKGMFENTGRHTKSLSIESASTLDPPEEEPATSRSQGSKPLNDSERAPNKSRTIKEEIVAKEAKEKLLQEMEQMKERFSKLLLGEDMSGGGKGVSSALALSNAFTNLAAAVFGEQKRLEPMPAERKARWRKEIDWLLSVTDYIVEMVPSQQKSKDGTNMEIMTTRQRTDLHMNIPALRKLDTMLIDCLDNFKDQNEFYYVSKDSDDSDKDSAKRKNDDKWWLPTPKVPAEGLSDAARRFVQYQKDCVNQVLKAAMAINAQTLSEMEIPESYIESLPKNGRASLGDLIYRNITDEFFDPDQFLATVDMSSEHKILDLKNRIEASIVIWKRKMNQKDSKSTWGSAVSMEKRELFEERAETILLLLKHRFPGLPQSSLDISKIQFNRDVGQAVLESYSRILESLAFTVLSRIDDVLHADLQTQNPSQAGRRSCVRNPIPRPEKCPTPKEEVDKGGADTPGSMTLSDFMGWSSDQGDSDVKKDPLAVTDDFYKDLDSGKPQKLPNVVTDKKVSYLETLGGMRSPTSRH* | 543 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops4g02148 | 542 | Gene3D | PRONE domain, subdomain 1 | 93 | 434 | - | - | |
| Rops4g02148 | 542 | Gene3D | PRONE domain, subdomain 2 | 284 | 400 | - | - | |
| Rops4g02148 | 542 | MobiDBLite | consensus disorder prediction | 30 | 75 | - | - | |
| Rops4g02148 | 542 | FunFam | Rop guanine nucleotide exchange factor 14 | 316 | 443 | - | - | |
| Rops4g02148 | 542 | Pfam | PRONE (Plant-specific Rop nucleotide exchanger) | 87 | 438 | IPR005512 | GO:0005085 | |
| Rops4g02148 | 542 | Coils | Coil | 72 | 99 | - | - | |
| Rops4g02148 | 542 | MobiDBLite | consensus disorder prediction | 438 | 497 | - | - | |
| Rops4g02148 | 542 | FunFam | Rop guanine nucleotide exchange factor 9 | 284 | 400 | - | - | |
| Rops4g02148 | 542 | PANTHER | ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 | 31 | 486 | IPR038937 | GO:0005085 | |
| Rops4g02148 | 542 | MobiDBLite | consensus disorder prediction | 30 | 62 | - | - | |
| Rops4g02148 | 542 | FunFam | Rop guanine nucleotide exchange factor 14 | 81 | 314 | - | - | |
| Rops4g02148 | 542 | ProSiteProfiles | PRONE domain profile. | 79 | 444 | IPR005512 | GO:0005085 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Rops4g02148 | Rops-Chr4 | 47956806 | 47959784 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops4g02148 | - | - | gmx:100777496 | 877.856 |