Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02134 ATGAGTAGCAGCAGCACTTCAGTTCCACCACAAGATGCTTGGATTCTCACTTCCCACAACTTGCTCCCTCGCTGGAAATCTCTTTCCCTCTCTCACCAGTCAACGATCCCAATTTCCATATCAAGAGTTAACCAAGTTGATGCAGCAAGACTGGATGTTGAAATGTCAGCCATGTTAAAAGAACAGTTGGTTAAAGTGTTCTCTTTAATGAAGCCAGGAATGCTATTTCAGTATGAAGCTGAGCTTGATGCTTTCCTTGAGTTTCTTATTTGGCGATTCTCAATTTGGGTGGATAAGCCAACTCCAGGCATTGCTCTCATGAACCTGAGGTACAGAGATGAGCGTGCGGTGGAATCTAGAGATAAAGTCAGAACTGGTCTGGGGGGACCTGGACTCACTGTTGCTCAGAAGATTTGGTATTGTGTTGCCACTGTTGGTGGTCAATACATCTGGGCTCGCTTACAATCCTTCTCTGCTTTTCGTAGATGGGGTGATACTGAGCAGAGACCATTGGCACGACGTTTATGGATCTTGATACAACGGATAGAAGGGATTTACAGAGCTGCTTCATTTGGAAACCTGTTAATATTTCTTTGCACGGGAAGATATCGAAATCTTATTGAAAGAGCCTTACGAGCCAGGCTGGTATATGGGAGCCCAAATATGAACCGTGCTGTTAGCTTTGAGTATATGAACCGACAATTAGTTTGGAATGAATTCTCGGAAATGTTATTGTTGCTTCTTCCTCTTCTTAATTCATCATCTGTGAAAAATCTCCTTCGACCTTTTTCTAAGGATAATTCATCGAGTTCAACCGAGGATGGCACTACATGTCCTATTTGCCAGGCTACTCCAACCATTCCTTTTGTTGCTCTACCTTGTCAGCACAGATATTGTTACTACTGTCTTAGGACACGATGTGCTGCAGCTCCATCATTTAGGTGTTCAAGGTGTAGTGAGCCAGTTGTTGCCATGCAACGCCATAGCGGTGTCTCCACGGAATGA 1005 0.4398 MSSSSTSVPPQDAWILTSHNLLPRWKSLSLSHQSTIPISISRVNQVDAARLDVEMSAMLKEQLVKVFSLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAVESRDKVRTGLGGPGLTVAQKIWYCVATVGGQYIWARLQSFSAFRRWGDTEQRPLARRLWILIQRIEGIYRAASFGNLLIFLCTGRYRNLIERALRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSVKNLLRPFSKDNSSSSTEDGTTCPICQATPTIPFVALPCQHRYCYYCLRTRCAAAPSFRCSRCSEPVVAMQRHSGVSTE* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02134 334 ProSitePatterns Zinc finger RING-type signature. 294 303 IPR017907 -
Rops4g02134 334 ProSiteProfiles Zinc finger RING-type profile. 278 319 IPR001841 -
Rops4g02134 334 Pfam Pex2 / Pex12 amino terminal region 52 256 IPR006845 -
Rops4g02134 334 Pfam Zinc finger, C3HC4 type (RING finger) 278 318 IPR018957 GO:0046872
Rops4g02134 334 PANTHER PEROXISOME BIOGENESIS FACTOR 2 2 333 IPR025654 GO:0005778|GO:0007031|GO:0008270|GO:0016558
Rops4g02134 334 CDD RING-HC_PEX2 276 322 IPR045859 -
Rops4g02134 334 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 252 332 IPR013083 -
Rops4g02134 334 SUPERFAMILY RING/U-box 271 324 - -
Rops4g02134 334 SMART ring_2 278 318 IPR001841 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02134 K06664 - gmx:100805856 611.683