Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02118 ATGGCACCCCATGGAGATTCTTTGGTTAGCTCTTTCTCTAGGAGCAACAACAACAACATATCAAAGGCACCAAAGTTCTCATCTGACCAACTTCAAAGAACAGTCTCAGACATCACATTTGAGCTAACCAAAGAAGGGATTGATTTGAAACTGCCACCAATATCTGAGGTTGAGGTTGCAAAGTGTGAGTGTTGTGGCATGTCGGAGGAGTGCACACCTGAGTACATAGACCGTGTGCGTGAAAAGTTCCAAGGGAAATGGGTATGTGGGTTGTGTGCAGAGGCAGTGAAGGAAGAGTTGGAGAAAAATGGTGGCAAAAAAGAAGAGGCTTTAAGTGCACATATGAGTGCATGTGTTAGGTTCAACAAATATGGTAGAGCTTTCCCTGTTCTTTTTCAAGCCCAAGCCATGAAAGAGATGCTCAAAAAGAATCATCTAGATGGGACAAGGGCTAAGTCTATTAGCCCTAGAGACAAAGGAGGGTCAAAGAAAGGAGGGCTTGCTCGTAGTTCAAGTTGCATTCCTGCAATCACAAGAGAATTGAATGATATCAAAATAGCCAATTAG 567 0.4321 MAPHGDSLVSSFSRSNNNNISKAPKFSSDQLQRTVSDITFELTKEGIDLKLPPISEVEVAKCECCGMSEECTPEYIDRVREKFQGKWVCGLCAEAVKEELEKNGGKKEEALSAHMSACVRFNKYGRAFPVLFQAQAMKEMLKKNHLDGTRAKSISPRDKGGSKKGGLARSSSCIPAITRELNDIKIAN* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02118 188 PANTHER OS01G0745000 PROTEIN 53 180 IPR012876 -
Rops4g02118 188 Pfam Protein of unknown function (DUF1677) 57 143 IPR012876 -
Rops4g02118 188 MobiDBLite consensus disorder prediction 146 171 - -
Rops4g02118 188 MobiDBLite consensus disorder prediction 146 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02118 Rops-Chr4 47650050 47650995 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02118 - - gmx:100816162 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02118 4 47650050 47650995 Rops4g02118 4 47650050 47650995 ECH
Rops7g00263 7 3427217 3428022 Rops4g02118 4 47650050 47650995 PCT