Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02110 ATGCCATTAACGTTAACACCACAAACCATGCCGGAAATCACCGTCGATTTCCGTGCTCCTCCACCATCTCCGGTGGCCTCCGGCAGAAGATCAACGGTCACAAACGACGACGTTTTAACACAGTTTCTAGAAGTCTCGCTTCGTGTCCCTGATCTGGTGTTGCCGGACAAGATCTTCCCGAAACAGAAGCTTCTAGAAACGCCTCCGAAGGTTGATTTCGTGTCGTTGTGTTTCCACCACGACGAAGAACTCTACGACGTCGTTTATGACTCCATGGCCACGTTCGGATGCTTCCAACTCCTCAACCACGGGATTTCGCCGCAACTTATCTCCTCCGCCGCCTCCGCCGCCGTCGGTATCTTTACGGTGCCACCTGGAAAACGAGCGCCGGCAATTAGGTCTCCGGAGAAGCCCTGGGGATTCGAGGAGTATCATGAAGGAGAAGAGGAAGAGGATCAAGGAAGTGAAGAATTCGTGTGGTGCAAAGAGGCTGAGTTCAATTCAAAAATGGAGGGAATTTTGCCAAATGAATATCCAAATTTCAGTAAGAAGATGGAAAGTCTCAAGTCACGAATAGAAAAGGTGGCGGAGAAAATTTTGGAAGTTATATTGAAAGATGTTCCTAGGAAATTTGTTAATGATGGTGGGCATGAAGTGGGGACGCTTTGTTGTGTTTTCAAGCATGGCAAAGATAATACGAATGATGGATTTGATAATACTTTGAAATATGAGGTGATTAGAATGCTGATTAGGGGAGGAGATTACTCTCATTCATTGTGCTTGCATGTGTGTGATGGGTCTTCAGAGTTTCATGTTTATTCCAAGAAAAGTTGGCTATCTTTCTGTCCAGAACAAGGTGCCATTATAATCACCGGTGGAGATCAAATCCAGATATTGAGTGGTGGGCACTACAAGCATGTGATTGGAAGGCCAATATTCAAAGGTGAGAAAGAAGACAACATTTCAATGGCTTTCCTTTATTCTCCTCAAAACACCAAGAACAATTTTGAAACCAATAGGGGAAGAACTATTTCCCTTGGCCAGCAAGCCATATTGGCTATAATTATGACCCTTATGTACCATGGCCTGACTTACGTCTACAAAAAACTTTGA 1113 0.4474 MPLTLTPQTMPEITVDFRAPPPSPVASGRRSTVTNDDVLTQFLEVSLRVPDLVLPDKIFPKQKLLETPPKVDFVSLCFHHDEELYDVVYDSMATFGCFQLLNHGISPQLISSAASAAVGIFTVPPGKRAPAIRSPEKPWGFEEYHEGEEEEDQGSEEFVWCKEAEFNSKMEGILPNEYPNFSKKMESLKSRIEKVAEKILEVILKDVPRKFVNDGGHEVGTLCCVFKHGKDNTNDGFDNTLKYEVIRMLIRGGDYSHSLCLHVCDGSSEFHVYSKKSWLSFCPEQGAIIITGGDQIQILSGGHYKHVIGRPIFKGEKEDNISMAFLYSPQNTKNNFETNRGRTISLGQQAILAIIMTLMYHGLTYVYKKL* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02110 370 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 11 366 - -
Rops4g02110 370 Gene3D - 67 336 IPR027443 -
Rops4g02110 370 Pfam non-haem dioxygenase in morphine synthesis N-terminal 71 169 IPR026992 -
Rops4g02110 370 SUPERFAMILY Clavaminate synthase-like 66 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02110 Rops-Chr4 47574520 47577119 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02110 - - psat:127076483 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02110 4 47574520 47577119 Rops4g02110 4 47574520 47577119 ECH
Rops7g00266 7 3452421 3455038 Rops4g02110 4 47574520 47577119 PCT