Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02107 ATGGAGAGAAACCAATCTCACAGGCAACTTGCTGCTATGAAACAGTCCCTCTTTGATCAGGGATTACTGGATGAACAGTTTGTCCAACTGGAAGAACTGCAAGATGATACTAATCCTAACTTTGTTGAGGAAATTGTGACTCTTTACTACCGTGATTCATCGCGGCTAATCTCAAACATAGAGCAGGCTCTAAGGGAGAAGAACCCTATGGATTTCAACAAGCTGGACACACTTATGCATCAGTTCAAAGGAAGCAGCTCAAGCATCGGAGCCAAAAAGGTGAAAGCAGAGTGCAATATGTTTAGGGAATATTGTAGGGCAGGAAATGCAGAAGGATGTATAAAGTGCTTTCAACAACTGAAGAAAGAATATGCTGCACTGAGAAAGAAACTTGAAGCCTATTTTCAGTTGGCTAGGCAAACTGGGCCCGCAGAGACAGCATGTCGCTCCAAATGA 456 0.432 MERNQSHRQLAAMKQSLFDQGLLDEQFVQLEELQDDTNPNFVEEIVTLYYRDSSRLISNIEQALREKNPMDFNKLDTLMHQFKGSSSSIGAKKVKAECNMFREYCRAGNAEGCIKCFQQLKKEYAALRKKLEAYFQLARQTGPAETACRSK* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02107 151 Coils Coil 117 137 - -
Rops4g02107 151 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 5 140 IPR036641 GO:0000160
Rops4g02107 151 FunFam Histidine-containing phosphotransfer protein 4 1 146 - -
Rops4g02107 151 Pfam Hpt domain 44 128 IPR008207 GO:0000160
Rops4g02107 151 Gene3D HPT domain 1 148 IPR036641 GO:0000160
Rops4g02107 151 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 6 144 IPR045871 GO:0000160|GO:0009927|GO:0043424
Rops4g02107 151 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 134 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02107 Rops-Chr4 47470253 47471943 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02107 K14490 - gmx:100798055 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02107 4 47470253 47471943 Rops7g00274 7 3545799 3548254 ECH
Rops4g02107 4 47470253 47471943 Rops4g02107 4 47470253 47471943 ECH
Rops7g00274 7 3545799 3548254 Rops4g02107 4 47470253 47471943 PCT