Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02106 ATGGCCTCTTATAGGCCTTACCCTCCACCATCGAGTCAAAACCCTAAACAACAAAGAGGGAATAATAATTGGGGTTCTTATGGTTATGGTGCACCAGATCCCTCATTCTCTCAAATCCCTCCAAATTCTTCCAATTACCCTCATCATCATAATGTTCCTCCTCCACCTCCACCTCCTCCTTCAAATTCCTCTTATCACCAACAACACCATTACCATCCATACCCTCCTCCACCGTTACCACCACCACCTCCGCCCCCACCGGAAGCTTCATATCAACCCCCACCACCACCACCTCCTGTTTATTATCCTTCAAATAATCAATACCCTCACCAACAACCACCACCACCTCTGCCACCGCCGCCTCCTCCTCCGCCACTATCTCCGGGTTCTGCTGTTCCACCTCCGCCTCCGCCACCTTTATCTCCGGGTTCTTCTGTTCCACTACCGCAAAATGAAGAGAGGCCGTTGCATAAAGGGTCATTGAAGGATCCTTCAACTTCTGGCAGGCGTGAATTCGAGCATTCAAATCATGGGAAACAGCATAAGCCTCCTGTGAATGGACCTCCTTCTTCTTCACGGAGGGGTGAGACTGAGGAAGAGAAGAGGTTGAGGAAGAAGAGGGAGTATGAGAAGCAAAGGCAAGAGGAAAAACATAGGCAGCAGCAGTTGAAGGAATCACAGAACAATGTTTTGCAGAAGACTCAGATGTTATCATCTTCCAAAGGGCATGGCGGTTCAATCGTTGGGTCTCGAATGGGAGAAAGGAGAACTACTCCATTGTTGAGTGGTGAGAGGATTGAAAATAGGTTGAAGAAGCCCACAACTTTCTTGTGTAAGCTCAAATTCCGGAATGAACTTCCAGATCCAAGCGCACAGCCTAAGCTCATGGCGTTCAAGAAAGATAAAGATCAATATGCAAAATATACGATCACATCTCTGGAGAAAATGTACAAACCCAAACTTTTTGTGGAGCCTGATCTAGGGATACCTCTGGACCTGCTTGATCTCAGTGTTTACAATCCTCCCAGTGTCAGACCACCTCTTGCTCCAGAAGATGAAGAATTATTGCGTGATGATGTTGCAGTTACTCCTATGAAAAAAGATGGCATAAAAAGAAAAGAGAGGCCCACTGATAAAGGTGTAGCTTGGCTTGTCAAAACACAATATATATCTCCTCTAAGCATGGAATCGACCAAACAGTCTTTAACTGAAAAACAAGCTAAGGAGCTGAGAGAGATGAAGGGAGGCCGTAACATTTTGGAAAATCTTAACAGTAGGGAAAGACAAATTAGGGAAATCGAAGCATCATTTGAAGCAGCTAAGTCACACCCTGTTCATGCAACCAACAAAGATTTGTATCCTATTGAGTTTATGCCATTGCTGCCTGATTTTGATAGGTATGATGATCAATTTGTTGTTGCTGCATTTGATAATGCTCCCACACCTGATTCGGAAACATACACTAAATTGGACAAATCTGTTCGTGATGTCTATGAATCGAGGGCTGTTATGAAAAGTTACGTTGCATCAAGCTCTGATCCTACAAATCCTGAGAAATTTTTGGCATACATGGCCCCAACACCTGGAGAGCTGTCAAAGGATATATATGATGAAAATGAAGAAGTCTCGTATTCTTGGGTTCGCGAGTATCATTGGGATGTTCGGGGTGATGATGCAGATGACCCTACAACATTCTTAGTTTCATTTGATGAGTCAGAAGCTCGTTATTTGCCTCTTCCAACTAAACTTGTTTTAAGGAAAAAGAGGGCTAAAGAGGGAAGATCAGGTGATGAGGTTGAGCAATTTCCAGCACCTTCAAGAGTGACCGTGAGGCGGAGATCAAATGTTGCTGCAATTGAGCGGAAGGATTCTGGGGTTTTTACAAGTTCAAAGGGCAATTCATCAAAGAGAGGGGGTCTAGAAATGGATGATGGTCTTGAACATCAACATAGAGTTGCAGCGCACCAGGACAATTATCAGTCTAGTGGAGCAGAAGATGACATGTCTGATTGA 2013 0.4441 MASYRPYPPPSSQNPKQQRGNNNWGSYGYGAPDPSFSQIPPNSSNYPHHHNVPPPPPPPPSNSSYHQQHHYHPYPPPPLPPPPPPPPEASYQPPPPPPPVYYPSNNQYPHQQPPPPLPPPPPPPPLSPGSAVPPPPPPPLSPGSSVPLPQNEERPLHKGSLKDPSTSGRREFEHSNHGKQHKPPVNGPPSSSRRGETEEEKRLRKKREYEKQRQEEKHRQQQLKESQNNVLQKTQMLSSSKGHGGSIVGSRMGERRTTPLLSGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLMAFKKDKDQYAKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRPPLAPEDEELLRDDVAVTPMKKDGIKRKERPTDKGVAWLVKTQYISPLSMESTKQSLTEKQAKELREMKGGRNILENLNSRERQIREIEASFEAAKSHPVHATNKDLYPIEFMPLLPDFDRYDDQFVVAAFDNAPTPDSETYTKLDKSVRDVYESRAVMKSYVASSSDPTNPEKFLAYMAPTPGELSKDIYDENEEVSYSWVREYHWDVRGDDADDPTTFLVSFDESEARYLPLPTKLVLRKKRAKEGRSGDEVEQFPAPSRVTVRRRSNVAAIERKDSGVFTSSKGNSSKRGGLEMDDGLEHQHRVAAHQDNYQSSGAEDDMSD* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02106 670 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 247 670 IPR007133 GO:0006368|GO:0016570|GO:0016593
Rops4g02106 670 MobiDBLite consensus disorder prediction 47 63 - -
Rops4g02106 670 MobiDBLite consensus disorder prediction 224 245 - -
Rops4g02106 670 MobiDBLite consensus disorder prediction 71 145 - -
Rops4g02106 670 MobiDBLite consensus disorder prediction 637 654 - -
Rops4g02106 670 Pfam Paf1 276 613 IPR007133 GO:0006368|GO:0016570|GO:0016593
Rops4g02106 670 MobiDBLite consensus disorder prediction 607 670 - -
Rops4g02106 670 MobiDBLite consensus disorder prediction 193 223 - -
Rops4g02106 670 MobiDBLite consensus disorder prediction 1 268 - -
Rops4g02106 670 MobiDBLite consensus disorder prediction 655 670 - -
Rops4g02106 670 MobiDBLite consensus disorder prediction 155 180 - -
Rops4g02106 670 Coils Coil 206 229 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02106 K15174 - gmx:100800148 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02106 4 47462431 47468413 Rops4g02106 4 47462431 47468413 ECH