Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02092 ATGAGGATGAAAATACTTGTTTTCTTTGTTGTTACCATGTTAGCAACATGCCATGGCTCAGACCATGGTGTAAACTACCAAATTTTCCCTCTCCGAATGAAAACTGGCTTAGGTGGCCACTACATTCCGGAGGTATCGTGTGCAAGTTGGAGGCTTGGTGTTGAAGCACACAACATCATTGACTTTACTACTATTCCAGAAGATTGTGAAGGATATATAGGGAACTATATTCTCGGTGATCAATATAGATCGGACTCCAAAACAGTTTGTAAGCAAGCTTTCTTTTATGCTAGAAGTCTCAATCTCACTGGAGACGGCAAAGACATATTCGTGTTTGACATAGATGAGACTTCACTCTCTAATCTTCCTTATTATGCTCAAAATGGATTTGGGGTGGAACCATATAATTCGACAAAGTTTAATGAATGGGTGTTGAGAGGCACAGCACCAGCACTGCCAGAGTCTCTTAAACTGTACAATAAACTGTTGAATCTTGGCCTCAAGATTGTATTCTTAACTGGAAGACCAACAGATCAAGAGGAAGTAACTGCTACCAACTTAAAGCAAGCTGGGTTCTCCACATGGGAAAAGTTAATTGTCAAGGATACATCATCATATCATGGTGCAACAGCAGTTACATACAAATCTGCTGAGAGGAAGAAGCTGGTGGAGGCAGGATACAGAATCATCGGAAACATTGGAGACCAATGGAGTGATCTCCTTGGAACCAACACTGGAGACAGGACCTTTAAGCTGCCTGATCCCATGTACTATATTAGTTAA 783 0.4112 MRMKILVFFVVTMLATCHGSDHGVNYQIFPLRMKTGLGGHYIPEVSCASWRLGVEAHNIIDFTTIPEDCEGYIGNYILGDQYRSDSKTVCKQAFFYARSLNLTGDGKDIFVFDIDETSLSNLPYYAQNGFGVEPYNSTKFNEWVLRGTAPALPESLKLYNKLLNLGLKIVFLTGRPTDQEEVTATNLKQAGFSTWEKLIVKDTSSYHGATAVTYKSAERKKLVEAGYRIIGNIGDQWSDLLGTNTGDRTFKLPDPMYYIS* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02092 260 CDD HAD_VSP 75 259 - -
Rops4g02092 260 Gene3D - 42 260 IPR023214 -
Rops4g02092 260 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 39 259 IPR005519 -
Rops4g02092 260 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 6 259 - -
Rops4g02092 260 NCBIfam plant acid phosphatase 44 259 IPR010028 GO:0003993
Rops4g02092 260 SUPERFAMILY HAD-like 101 257 IPR036412 -
Rops4g02092 260 PIRSF VSP 1 260 IPR014403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02092 Rops-Chr4 47299547 47301338 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02092 - - gmx:547669 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02092 4 47299547 47301338 Rops4g02092 4 47299547 47301338 ECH