Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02048 ATGGGTAGTTCAGGAGAGTCAAATATCAACGGAATCGATGCGTCGGTGGGTGGTTTGGTTTGGGTCCGACGCAGAAACGGGTCATGGTGGCCGGGTCGGATAATGGGTCTTGATGAATTGTCTGAGAGTTGCTTGGTTTCTCCGAGATCGGGTACTCCGGTTAAGCTCTTAGGTCGCGAGGATGCTAGTGTGGATTGGTATAATCTTGAAAAATCAAAGAGGGTAAAAGCCTTCCGTTGTGGAGAGTATGATGAATGCATTGAGAAGGCAAAGGCATCAGCTGCCAATTTAAACAAGAAGGCAGTGAAGTATGCTCGAAGGGAAGATGCTATTCTTCACGCTCTTGAGCTAGAGAGTGCTCTCCCGGACAAGGAACCGTTAAACTTGTGCTCCAGTTTAGATAAATATGGTAGTGAACATGGTGGATCAGCTGGAGACTTACCAGTCATGTCTAATTCTGGTGATGATGACAACGAGGATGTGACCGATGATCTGAGTGACTCTGAAGACAATTCTAATTCAGCTCCAGAGTTATCACAATCTGGTATATCTTTTGAAGAGCCTAATCGTAATGGTTCTTTAAGGATGCAGTCTGTGCAGGGAAGGAGGAGAAGAACGCCCAATGATTCAGAAGATGATGGAACTGAAGGAGTCAAACGAATGAGAGGACTTGAGGACCTGGGCATTGGTGTAGCGTCAAAGAGAAAGGTTCATGGTACAGGTACAACTGAGATAGTTCAGCACGTTGGTGCTTCACTCAGCAATTCAACCGCTGGGAACTGCATGGCAAATGGAACTTCTGTAAATGGTGGTAAGGGTTATTCTTCAACACTGAAAAGGAAGAGATCACAAGTGGCAAATGTTCATGAATTATTGAAAAGGAAAAATCGACGCCGGCCTTTGACAAAGGTTTTGGAGAGTACAGCCATGGTGTCAGTTCCAGTCATTTGTGATGAGCTTCCCAGTTCAAGCAGTTCTCCTCTATGTTTGATAACTGATGGAAGGATTTCAGGATTAGATTCTAATTATTCAAAGAAAAGTTCTCCAATGGCAATTCACAATTCAGATAGTACTGGGGCTGCTTGTGAAAATGGGACTTCATTGATTGTTCATGACCACAGTAATGATGCCTCCCTAATCAATCACAAGGTCAAGGAGAATGAGACTTCGGGCATACTAGGACTAGGTGGCAATGATTCTTCTGACAAATTATTTGATGTGCCATTTGTTGGGGTTCTAGGGGAGGAGAAACACACTCCAGGTTTCTCACCTGCACTTGTTTCTTGTTCATCTGGAAAGCCTCAAGCTAGTGCATTGGGACAGCAATCTTGTGATGCTAGTCAATCTGAAGCTGTGTCATTGAGAAATGAGGGCAAGAATGAATCTGGTTGTACCAGTTCAGCAGCTGGTCACAATATTGTTGGGCATAGAGCAGACAAAGGTAGTTCAAAATGGCAGTCAAAAGGAAAGAGGAATTCAAGACATACAAGTAAAAATAGAAGACAAGTCTCAAGGAAATATGTGAACATGGATTGTGAATCCGGTGCTCATTTACCAGGAATAGGGAACTCAGATGGATTCTGTCATGGTGCTGGTCAGAAAGTTGGTTGGAATGGCATGGATGCACCTGATGCTTCATACAATTGTACTTCTCAAGTTAAGTGCAAACCTGTTGCTGAAGGCCAACCAGATGGATTTCGGGACATGAACAAGCATATCAGGGGAACAACTGCAGAGGTGAAGCTATTGGCTGATGGATCTCTGATGCCTCAGAGATTGCTTCCTTATCGCCATTCACGCTTTACTGTTAACTCCAGATATCAAATGGCAGAATTTCCTGGAAGAAATTATTGTTCTGATGCTTCATTATATGATGTTAAGCTGGAAGTTAAATCCAGCTACCGGCCTCAACATGTCCCTTTGGTTTCTCTTGTGAGTAAACTGAATGGCAAAGCCTTTATTGGACACCCTTTGACAGTTGAGGTTTTGGATGAAGGTCATTGTGATAAAATGTTGAATGGCATTGGATGTGACTTGGAAATTGGTGACGTCTATTGTGTGCCAAAGCCAAACTCGGTAACCGGAAGAATACCTTCCAAGAATTTACCCCGATTTTCACCTGGTAAATCTTCAAAGACAAGAAAATCTGGGCTGTTGAATAAAAAGATTCGGAAGTTGTCCTCGTTGACTGGTCAGAGGCAGTCAGAGGAGGAGAGACAACCAGTGGTAGATAAGCTGAAGGGTCCTGTTATAGCTTGTATTCCCCTAAAAGTAGTATTCAGTAGGATAAATGAAGCAGTGAGTGGTCAGGCACGGTTGACACACCGTGCATTACCAGCATCCAACCCATGA 2352 0.4366 MGSSGESNINGIDASVGGLVWVRRRNGSWWPGRIMGLDELSESCLVSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEYDECIEKAKASAANLNKKAVKYARREDAILHALELESALPDKEPLNLCSSLDKYGSEHGGSAGDLPVMSNSGDDDNEDVTDDLSDSEDNSNSAPELSQSGISFEEPNRNGSLRMQSVQGRRRRTPNDSEDDGTEGVKRMRGLEDLGIGVASKRKVHGTGTTEIVQHVGASLSNSTAGNCMANGTSVNGGKGYSSTLKRKRSQVANVHELLKRKNRRRPLTKVLESTAMVSVPVICDELPSSSSSPLCLITDGRISGLDSNYSKKSSPMAIHNSDSTGAACENGTSLIVHDHSNDASLINHKVKENETSGILGLGGNDSSDKLFDVPFVGVLGEEKHTPGFSPALVSCSSGKPQASALGQQSCDASQSEAVSLRNEGKNESGCTSSAAGHNIVGHRADKGSSKWQSKGKRNSRHTSKNRRQVSRKYVNMDCESGAHLPGIGNSDGFCHGAGQKVGWNGMDAPDASYNCTSQVKCKPVAEGQPDGFRDMNKHIRGTTAEVKLLADGSLMPQRLLPYRHSRFTVNSRYQMAEFPGRNYCSDASLYDVKLEVKSSYRPQHVPLVSLVSKLNGKAFIGHPLTVEVLDEGHCDKMLNGIGCDLEIGDVYCVPKPNSVTGRIPSKNLPRFSPGKSSKTRKSGLLNKKIRKLSSLTGQRQSEEERQPVVDKLKGPVIACIPLKVVFSRINEAVSGQARLTHRALPASNP* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02048 783 ProSiteProfiles PWWP domain profile. 16 71 IPR000313 -
Rops4g02048 783 CDD PWWP 17 108 - -
Rops4g02048 783 MobiDBLite consensus disorder prediction 168 201 - -
Rops4g02048 783 Coils Coil 87 107 - -
Rops4g02048 783 MobiDBLite consensus disorder prediction 202 222 - -
Rops4g02048 783 MobiDBLite consensus disorder prediction 697 717 - -
Rops4g02048 783 MobiDBLite consensus disorder prediction 138 222 - -
Rops4g02048 783 PANTHER T17B22.17 PROTEIN-RELATED 1 781 IPR044679 -
Rops4g02048 783 Pfam PWWP domain 18 107 IPR000313 -
Rops4g02048 783 MobiDBLite consensus disorder prediction 450 504 - -
Rops4g02048 783 Gene3D - 6 119 - -
Rops4g02048 783 MobiDBLite consensus disorder prediction 697 714 - -
Rops4g02048 783 MobiDBLite consensus disorder prediction 487 502 - -
Rops4g02048 783 SUPERFAMILY Tudor/PWWP/MBT 14 118 - -
Rops4g02048 783 MobiDBLite consensus disorder prediction 450 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02048 Rops-Chr4 46808667 46814518 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02048 - - gmx:100791879 1278.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g02048 4 46808667 46814518 Rops4g02048 4 46808667 46814518 ECH