Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01972 ATGGTGGTTGCCTCCTCCATTCGCCTTCTTCCTTCTTCCCTCGCTTCTTTTGCTTCACATCGTTCTCCATATTCATGGTGGTGGCGTCCCTCTTCCATCTCATTCCCCACCTCCATTTCAGTTTCTCCCATCCACTCCACTACTTCTTCTGGAAATGGAGATGTTGGTGGGGTGGAATTACCTGGTGGTGATCAAACAGAAGTTATATTTATGGGGACTGGAACTAGTGAAGGGATTCCTAGAGTTAGCTGCTTGACTAATCCTTCTAACAAATGTCCGGTCTGTTCAAAAGCTGACCAACCGGGTAATAAGAATAGAAGACTCAACACAAGCATCCTCATTCGTCACCCTAGCTCCTCAGAAACACACAATATTCTTATAGATGCTGGAAAATTTTTCTATCAGAGTGCCCTCCGATGGTTTCCTGCATATGGGATAAGAACAATTGATGCGGTTATTATTACTCATTCACATGCCGATGCGATTGGAGGTCTTGATGATCTTAGAGATTGGACAAACAATGTTCAGCCTTATATTCCAATATATGTAGCCAAGCGTGACTTTGAGGTGATGAAGAAGACCCATTATTATTTAGTAGATACAAGTGTTGTCTTACCTGGTGCAGCAGTCTCAGACTTGCAATTCAATATCATATCTGAAGAACCATTTTTTGTACATGGTTTGAAGTTTACCCCATTACCAGTGTGGCATGGCAAGAATTATCGGTCCCTTGGTTTTCGTTTTGGCAATATATGTTACATAAGTGATGCTAGTGAAATTCCTGAAGAAACCTATCCACTTTTGAAGGACTGTGAAATTCTCATCCTGGATGCTTTGAGGCCTGATCGATCTACAGCCACACATTTTGGACTTCCAAGGGCCTTAGAGGAAGTGCGAAAAATTCAACCCAAAAGGACACTTTTTACAGGTATGATGCATCTGATGGATCATGGTGAAGTGAATGGCTACCTTAAAAAACTAATGGAGTCTGAGGGCCTTGATGCACAACTGAGCTATGATGGGCTTCGTATACCAGTCAGACTCTAG 1047 0.425 MVVASSIRLLPSSLASFASHRSPYSWWWRPSSISFPTSISVSPIHSTTSSGNGDVGGVELPGGDQTEVIFMGTGTSEGIPRVSCLTNPSNKCPVCSKADQPGNKNRRLNTSILIRHPSSSETHNILIDAGKFFYQSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQPYIPIYVAKRDFEVMKKTHYYLVDTSVVLPGAAVSDLQFNIISEEPFFVHGLKFTPLPVWHGKNYRSLGFRFGNICYISDASEIPEETYPLLKDCEILILDALRPDRSTATHFGLPRALEEVRKIQPKRTLFTGMMHLMDHGEVNGYLKKLMESEGLDAQLSYDGLRIPVRL* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01972 348 SMART Lactamase_B_5a 108 311 IPR001279 -
Rops4g01972 348 Pfam Beta-lactamase superfamily domain 123 309 IPR001279 -
Rops4g01972 348 Gene3D - 62 347 IPR036866 -
Rops4g01972 348 CDD metallo-hydrolase-like_MBL-fold 67 278 - -
Rops4g01972 348 PANTHER HYDROLASE C777.06C-RELATED-RELATED 67 347 - -
Rops4g01972 348 SUPERFAMILY Metallo-hydrolase/oxidoreductase 67 345 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01972 Rops-Chr4 45459176 45464084 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01972 - - gmx:100786919 570.466