Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01962 ATGCAAACGGTAACGATAAGACCAGTTGATTATGAGTCCAAGGAAGGAGAGATCACACTGAGAACAATGAGCTGCAAGAAGGGAAGAAATTTTGATGACTTGTATAAACCTCATGAGTTGGATGAGGTTATTACTGAAGAATCTACATTCTCGAAGAGAAGGAAGATGGGAAATCTGAAGCTGCAAACCACATTCTCATTCAAATATCTAGTTTCAGATAATTCTAGCTCAAATGAGGGTGTTGATGACTTGTTCAATAAACAAAACCCCACAATTTTGTTAACAAAACCAGAAATTTGGTTTTCACCAAAGTCAATTGGGGAGCTTGATATAGCTGCAATAAAGCTGCAAAAAGTTTACAAGAGCTACAGGACTAGAAGAAACTTGGCAGATTGTGCAGTTGTTTGTGAGGAGCTATGGTGGAAAGCTTTAGATTTTGCTGCTCTTAACCGGTGCTCTATATCACATTTTAACTCAGTTAAATCAGAAACTGCTATTTCAAAATGGTCAAGAGCTAGGACAATGGCTGCTAAGGTGGGAAAAGGATTGTGTAAAGATGATAAGGCACAGAAATTAGCTCTAAGGCACTGGCTTGAAGCTATTGATCCACGTCACCGTTATGGACACAACCTTCACTTATACTATGATGTTTGGTTTCATAGCCAGAGTTCACAACCTTTTTTCTACTGGCTGGATGTTGGAGATGGAAAGGAAGTAAACCTTGAAAAGTGCCCAAGAAGTGAATTACAGAGGCAGTGCATAAAGTACCTTGGACCCATAGAAAGGGAAGCATATGAAGTGGTTGTAGAGGGAGGAAGGCTTGTTTATAGAAAAAGCAAGAACCTTCTACACACTTCTGAGGGATCCAAGTGGATTTTTGTTTTAAGCTCATCTAGAATTTTGTATGTTGGTGAGAAGAGGAAAGGCCAATTTCAGCACTCAAGTTTTCTAGCTGGGGGTGCTACTATTGCATCTGGAAGATTGGTTGCCCAAAATGGAGTTCTTGATGCTATTTGGCCCTATAGTGGTCATTACTGTCCTACAAAGAAGAATTTTATGGAATTCATTGGCTTCTTGATGGAACATAATGTGGACTTGACAAATGTAAAGAAGTATGCAATTGATGATGATGTCCCACCTTCAAAACCGGTTGACAAGGAGCTGCAGTTTGAGTCCACAGAGGCTAATGCACCTTCCAAGGACACTGCCACTGCCAAAAATTGTAGTCAAGATAATGTGGGTCACTTTGGTACCAATGAAGAAACTTCACAAAATAAAGACAGCAATCCATTGTCAAGAAAATGGACCACTGGAGCTGGTCCTCGGATTGGTTGTGTGAGAGAGTACCCAGCAACACTCCAAGTTAAGGCACTTGAACAACTCAATCTATCACCTAGAGTCAACCCTGGAAAAGTTACTACTAGGACACCCATTCCTTCTCCAAGGCCTAGTCCAAAAATTCACTTGTCCCCTAGACTTGTTCACATGGGAATTCCTAGCCCAAGAGTACATGTTACTCCTGCAAATTAG 1530 0.4072 MQTVTIRPVDYESKEGEITLRTMSCKKGRNFDDLYKPHELDEVITEESTFSKRRKMGNLKLQTTFSFKYLVSDNSSSNEGVDDLFNKQNPTILLTKPEIWFSPKSIGELDIAAIKLQKVYKSYRTRRNLADCAVVCEELWWKALDFAALNRCSISHFNSVKSETAISKWSRARTMAAKVGKGLCKDDKAQKLALRHWLEAIDPRHRYGHNLHLYYDVWFHSQSSQPFFYWLDVGDGKEVNLEKCPRSELQRQCIKYLGPIEREAYEVVVEGGRLVYRKSKNLLHTSEGSKWIFVLSSSRILYVGEKRKGQFQHSSFLAGGATIASGRLVAQNGVLDAIWPYSGHYCPTKKNFMEFIGFLMEHNVDLTNVKKYAIDDDVPPSKPVDKELQFESTEANAPSKDTATAKNCSQDNVGHFGTNEETSQNKDSNPLSRKWTTGAGPRIGCVREYPATLQVKALEQLNLSPRVNPGKVTTRTPIPSPRPSPKIHLSPRLVHMGIPSPRVHVTPAN* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01962 509 MobiDBLite consensus disorder prediction 389 436 - -
Rops4g01962 509 MobiDBLite consensus disorder prediction 466 489 - -
Rops4g01962 509 MobiDBLite consensus disorder prediction 392 435 - -
Rops4g01962 509 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 50 487 IPR044159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01962 Rops-Chr4 45337243 45340085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01962 - - gmx:100805874 810.446