Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01920 ATGGTTGATAGCAATGCTTCCTCTGGAACACCAGAAGAAACTCAAAATCCCAACCCAGATGGGAATGCACCTTCTGAAAGTGATCTTGCATTGGATAATCTAGCGCAAAAAGTTCAAGAATCTCTCTCTCTGGAAAAAAGACATAAATTTTGGGAAACCCAACCTGTTGGGCAGTTCAAGGAAATAGGGGACACCAGTTTGCCAGAGGGCCCTATTGAACCTCCAACCCCCTTAACTGAGGTCAAACAGGAACCATACAACCTTCCTAATCTCTATGAATGGGTTACTTGTGACATCAACAATGACCAGATGTGCGATGAGGTATACAACCTTCTTGCTAATAATTATGTTGAGGATGATGAGAACATGTTTAGATTTAACTATTCCAAGGAATTTCTGCGCTGGGCTCTGCAACCTCCTGGGTATTTCAAGAGTTGGCATATTGGTGTCCGTGTTAAAAGTTCCAAGAAGCTGGTTGCCTTTATAACAGGTGTTCCTGCTAGAATTCGAGTCCGTGATGAGGTTGTTAATATGGCAGAGATTAATTTTCTGTGTGTCCATAAGAAGCTTCGAACAAAGAGGCTTGCTCCTGTCATGATCAAAGAGGTGACCAGGAGGGTGCACTTAGAGAATATGTGGCAGGCAGCCTACACTGCTGGAGTGGTTCTCCCTACACCAGTAGCAACCTGCCAATACTGGCACAGATCTTTGAATCCCAAGAAGCTAATTGATGTTGGTTTCTCTCGGCTTGGTGCGCGGATGACAATGAGTCGAACCATCAAGCTTTACAAGCTACCAGAATCAACAGTCACCCCAGGGTTTAGAAAGATGGAAATTCATGATGTTCCTGCGGTTACGAGGCTAATTAGGAATTATTTGAGCCATTTTGTAGTTGCACCTGATTTTGACGAAAATGATGTGGAGCATTGGCTTCTTCCAAGGGAGAATGTTGTTGATAGTTATCTGGTTGAGAGTCCTGAAACCCATGAGGTCACTGACTTTTGTAGTTTTTACACACTTCCTTCTACTATCCTTGGCAACCAAAATTATTCAATCCTGAAAGCAGCCTATTCATTTTACAACGTTTCAACAGTTACCCCATGGCTTCAGCTGATGAATGATGCTCTCATTGTAGCAAAACAGAAGGATTATGATGTTTACAATGCATTGGATGTCATGCAGAATGAAACCTTCTTGAAGGACCTGAAGTTTGGACCAGGTGATGGTAAACTTCATTATTATCTTTACAACTACCGAATAAGGCATGCATTGAAGCCGTCAGAGCTTGGGCTTGTGCTTCTCTAG 1305 0.4276 MVDSNASSGTPEETQNPNPDGNAPSESDLALDNLAQKVQESLSLEKRHKFWETQPVGQFKEIGDTSLPEGPIEPPTPLTEVKQEPYNLPNLYEWVTCDINNDQMCDEVYNLLANNYVEDDENMFRFNYSKEFLRWALQPPGYFKSWHIGVRVKSSKKLVAFITGVPARIRVRDEVVNMAEINFLCVHKKLRTKRLAPVMIKEVTRRVHLENMWQAAYTAGVVLPTPVATCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPESTVTPGFRKMEIHDVPAVTRLIRNYLSHFVVAPDFDENDVEHWLLPRENVVDSYLVESPETHEVTDFCSFYTLPSTILGNQNYSILKAAYSFYNVSTVTPWLQLMNDALIVAKQKDYDVYNALDVMQNETFLKDLKFGPGDGKLHYYLYNYRIRHALKPSELGLVLL* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01920 434 Gene3D - 39 434 - -
Rops4g01920 434 MobiDBLite consensus disorder prediction 61 80 - -
Rops4g01920 434 MobiDBLite consensus disorder prediction 1 29 - -
Rops4g01920 434 Pfam Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain 244 422 IPR022677 GO:0004379
Rops4g01920 434 Pfam Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain 71 230 IPR022676 GO:0004379
Rops4g01920 434 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 2. 403 409 IPR022678 GO:0004379
Rops4g01920 434 FunFam Glycylpeptide N-tetradecanoyltransferase 40 434 - -
Rops4g01920 434 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 232 434 IPR016181 -
Rops4g01920 434 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 46 231 IPR016181 -
Rops4g01920 434 MobiDBLite consensus disorder prediction 1 23 - -
Rops4g01920 434 PIRSF N-myristl_transf 10 434 IPR000903 GO:0004379|GO:0006499
Rops4g01920 434 FunFam Glycylpeptide N-tetradecanoyltransferase 44 216 - -
Rops4g01920 434 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 1. 180 188 IPR022678 GO:0004379
Rops4g01920 434 PANTHER N-MYRISTOYL TRANSFERASE 34 434 IPR000903 GO:0004379|GO:0006499
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01920 Rops-Chr4 44545715 44549327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01920 1 434 Acyl Lipid Metabolism Gene Families AT5G57020 79.263 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01920 K00671 - gmx:100817419 835.484