Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01897 ATGAGTCATCCCGAGTCAATACCAATTGTTGGGGAAGAAGAGAGGGGTTGTCTAAGGTGTTTAAAGCGAGCAGGAGAATGGTTGGAATATAAGGATAAGGGTGAATGGTTGAATGAAATGAGAGGGAGTCTGAGTATGACAGCTTCCATAATCGCAACAATGACCTTTCAACTCGCCACTAACCCACCCGGTGGAGTCCTACAGGTAAGCGCTGACAATGTAACCCTCGATTGTTCACCACCCGGTATATGTCCTGGGGAAGCTGTCTTGGGTGCTTCTCCTCGACACGAAGATGTTTATGGCAGATTCTTGGTATGCAACACCATCTCATTCGTTGCATCTTTAAGTGTGTGTCTCTTGCTTGTAAGTGGAATCCCTCTCAACCACGCATTCCCCATTTGGCTCTTATCAATAGGAATGTGCATCACCATCACAAGCCTCGCTCTTACCTACTTGTATGCTGCCCAAATGGTCACCCCAGATCCCATTTGGAATCATAGTACCAGTATGTTTAATCGTGTTCTTTATGTTTGGATTGTCTTGTTAGGATTCGTCGGTGTTTTCATCGTCGTACGCTTATTCATTTGCGGTGTGAATAAATGGATAAAGAAACGTAATGGCCAGTCACAGTGA 633 0.4502 MSHPESIPIVGEEERGCLRCLKRAGEWLEYKDKGEWLNEMRGSLSMTASIIATMTFQLATNPPGGVLQVSADNVTLDCSPPGICPGEAVLGASPRHEDVYGRFLVCNTISFVASLSVCLLLVSGIPLNHAFPIWLLSIGMCITITSLALTYLYAAQMVTPDPIWNHSTSMFNRVLYVWIVLLGFVGVFIVVRLFICGVNKWIKKRNGQSQ* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01897 210 Pfam Domain of unknown function 35 152 IPR026961 -
Rops4g01897 210 PANTHER CASKIN 29 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01897 Rops-Chr4 44046539 44047670 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01897 10 206 Miscellaneous Gene Families AT1G10340 24.510 4.54e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01897 - - aprc:113851037 203.371