Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01892 ATGGCTGGGGAAAAAGAGAGGGGTTGTCAAAAGTTTTTAAAGCGTGCAGGAGATTTGTTCGCATATAAGGATAAGGAAAAATGGTTGAAAGAAATGAGAGGGAGTCTGAGTTTGATGGCTTCCATAATCGCAACAATGACCTTTCAACTCGCCACTAACCCACCGGGTGGTGTCTTTGAGGCAAGCTACACTGACAATATAACCGGTCTCGTTTGTAATAGACACAATCCACCATGCCCTGGGGAAGCTGTCAAGGGTGTCATAAACAGAAAGACTTATCTTGCATTCTTGGTATGCAACACCATCTCTTTCTTGGCTTCTCTCAGTGTGTGTCTCTTGCTTGTAAGTGGAATCCCTCTCGACCACACACTCCCCATCTGGCTTCTATCAGCAGGCATGTGCATCACCATCACAAGCCTCGCTCTTACTTACTTGTTTGCTGGCTTCATGGTCACCCCACCTAACATTTGGCCTGAGACTATCAGTTATTTTGGTATAGCTCTTATAGTTTGGATTGGCTTGATAGTAATCGTCGGTGCTTTCTTCATCTTACGCTTAATCGTTCGGCGTGTGAACAAAGGCCCAAGTAACAGTGAGAATCGTACAACTTCCTTTTAG 618 0.4482 MAGEKERGCQKFLKRAGDLFAYKDKEKWLKEMRGSLSLMASIIATMTFQLATNPPGGVFEASYTDNITGLVCNRHNPPCPGEAVKGVINRKTYLAFLVCNTISFLASLSVCLLLVSGIPLDHTLPIWLLSAGMCITITSLALTYLFAGFMVTPPNIWPETISYFGIALIVWIGLIVIVGAFFILRLIVRRVNKGPSNSENRTTSF* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01892 205 Pfam Domain of unknown function 26 145 IPR026961 -
Rops4g01892 205 PANTHER CASKIN 14 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01892 Rops-Chr4 43911717 43912527 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01892 3 170 Miscellaneous Gene Families AT1G10340 24.432 9.08e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01892 - - aprc:113851037 190.274