Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01857 ATGAGCTTTCTGTTCGGTAATAGAAAAACTCCCGCAGAGCTTTTGAGGGAAAATAAAAGGATGTTAGACAAGTCCATTAGAGAAATTGAAAGGGAAAGACAAGGCTTGCAGAATCAAGAAAAGAAGTTGATTGTGGAGATTAAGAAGAATGCCAAACAAGGACAAATGGGGGCAGTGAGAGTGATGGCCAAGGATCTTATCAGAACTCGTCATCAGATTGAAAAGTTTTACAAGCTCAAATCACAACTTCAGGGTGTTGCTTTGAGAATTCAGACACTAAAATCCACTCAAGCAATGGGGGAGGCTATGAAAGGAGTTACTAAAGCAATGGGTCAAATGAATAGGCGGATGAATTTGCCTTCCTTACAAAGGATAATGCAAGAGTTTGAAAGGCAGAATGAGAAGATGGAACTGGTGTCTGAGGTGATGGGAGATGCAATTGATGATGCTTTGGAAGGTGATGAAGAAGAGGAAGAGACAGAAGAGCTTGTGAATCAGGTTCTTGATGAGATCGGAGTTGATATCAACTCTGAGCTTTTGAATGCACCTGCATCAACCTCAGTCACTGCACCAGCTGCAAAAAACAGGGTTGCTCAAGCTGAATCAACAGGCAATGAAGACAGTGGAATAGATGATGATCTACAGGCTAGGTTAGATAACCTGAGAAAAATGTAA 675 0.4133 MSFLFGNRKTPAELLRENKRMLDKSIREIERERQGLQNQEKKLIVEIKKNAKQGQMGAVRVMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRRMNLPSLQRIMQEFERQNEKMELVSEVMGDAIDDALEGDEEEEETEELVNQVLDEIGVDINSELLNAPASTSVTAPAAKNRVAQAESTGNEDSGIDDDLQARLDNLRKM* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01857 224 Coils Coil 119 139 - -
Rops4g01857 224 Pfam Snf7 17 184 IPR005024 GO:0007034
Rops4g01857 224 MobiDBLite consensus disorder prediction 186 205 - -
Rops4g01857 224 MobiDBLite consensus disorder prediction 210 224 - -
Rops4g01857 224 Coils Coil 12 46 - -
Rops4g01857 224 MobiDBLite consensus disorder prediction 186 224 - -
Rops4g01857 224 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 222 IPR005024 GO:0007034
Rops4g01857 224 Gene3D - 6 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01857 Rops-Chr4 43212649 43220645 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01857 K12191 - qsu:111998886 358.607