Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01846 ATGGGTTCTCGAGGAAGGCCAATATTTGATCTCAATGAGCCACCTACAGAGGATAATGATGAGAGGGATGGTAGTTTCTGCTTCCATCCCCAAATAACACACCCATCGACAAATCCCCATGCTTCTGACATATTGGTGGCATCAACTGCTGCCCAAGGAATAAAAAATAATCATGCTTTTTCACATGCCTCATCTGTCTCTGGATTTCAACCTTTTGTTCGGCCTAAACCCGACGCAGATGCTGAACCGAAGAGAGCAGGAGATCAGGATGCAAAGGCTTCCTCCAAGTCCAGTAAAGATGAGGATGTGAAAGTTATGGATTCACGGATATTCAGTTCGACGAATGCTCAATCTACAGAGAGGGAAGAAGGGGAATGGTCTGACCAGGAGGGCTTCACTGATGCAAATGGAGGTAATAATTTGCTAAAACAAAGTCAAACTTCAGAAGAGCAAACAACATCTGGAATGGTGGATGGGTGTGTTGCAGTGGCTTCTGACAGTAAGTCTAGCAATATTAGAAGTTCTGATAGTATAAATGATGAAAAGAGTAGCCATGTTTCTATAGGAATAGAATCAAATTCTAGTGAACAGAAAAGCAATGGTATCCCAAATTCAGAAAGCAATGTAAAAAGTGAAGCTGTAATTGATGCACAGGAGGAACCCAGTGCAGTTCCCAAGCAAAAAGAAGTGAAGGGTATTGAAGCAAGTCACGCACTTAAGTGTGCAAATAATCCTGGGAAGAGGAAGATTGACCAACGTAAAGAGGAAATGCTGGGAAAGAAACGTAATAGACAGACCATGTTTCTTAACTTGGAAGATGTCAAGCAAGCAGGTCCTATTAAAACCTCCACCCCTAGGAGGCAGACTTTTGCATCACCTGTTATAACCCGTACTGTGAAGGAAGTCCGTACTGTTCCTGCACAAGTTGAGCGTACTGCAATAGCTAAGGATCAGAAACAGGTTGACCCATCTTTTGGTGAAGGTGGCACCCAAGCTGAAGCACATGAACCTAAATCTGATTGTAATGGTGATTATTCTGGACTACTTGGTCGGTCTAGGAGGATAAACAGTGAGATGGAACCTCCTACAGAGGTCAATTTCCCACCCATTCCAAGACAGGGTTCATGGAAACAACCGACAGATTCGAGGCAGCAGAAAAATGCACTCATTTCTAGTAGGAAGTTGGGACAGAGCGGTCAAGGCTCCAGTGATGTCAAGCTGGGAAACAAGAAGCATCTTTCTATCAAGAAGCAGACTCCTGTCAGTGTCCAGTCTCAGGATACTTCTGTTGAACGCCTCATCCGGGAGGTGACCAGTGAAAAGTTTTGGCATCACCCAGTTATCACACTGAGAGTCATAACACTGGAGAGACATGCAAAGGTGATGATAGTTGTTTTTGGAATGAAATTTGATATTGGTTTGATAGCTTCCACTGGTTTACATGAATTCATTATATCCTGTGATACAGAGGAGACCGAGTTACAGTGTGTTCCTGGACGGTTTGAATCGGTAGAAGACTATGTTCGGGTATTTGAGCCTTTGCTTTTTGAGGAATGCCGGGCTCAACTTTACAGTACCTGGGAAGAAGCAAAAGAAACAGTGTCAAGGGATACACATATTATGGTGCGAGTGAAGGCAAATGAGTCAAGAGAAAGAGGTTGGTATGATGTGAAAGTCATTCCAGTACATGAGTTCAAATGGTCATTTAAGGAGGGTGATGTTGCAGTCCTTTCGTCCCCTAGGCCTGGATCAGTCAGATCCAAGCAAAACAGTTCATCTTTAGTTCAGGATGATGGGGAATCAGAAATCACTGGACGTGTGGTGGGTACAGTTAGGCGACACATAGCTATCGATACCCGTGATCCTCCTGGTGCAATTCTCCACTACTATGTTGGGGACTCCTATGATCCTAGCAGGGTTGATGATGATCATATCATAAGAAAACTTCAAATTGGAAGCATCTGGTATCTCACAGTGCTTGGTTCTCTTGCTACCACACAGAGGGAGTATATTGCTCTACATGCATTTCGTCGCTTAAATGTGCAGATGCAAACTGCAATCCTTCATCCTAGTCCTGAACACTTTCCAAAATATGAGCAACAGACCCCGGCCATGCCTGAATGCTTCACACAGAACTTTGTTGAGTATCTACGTAGGACCTTCAATGAACCCCAATTGGCAGCAATCCAATGGGCAGCAATGCATACAGCTGCCGGTACAAGTAGTGGGACAACAAAGAGGCAAGAACCTTGGCCCTTTACCCTTGTTCAAGGGCCTCCAGGAACAGGAAAAACACATACAGTATGGGGAATGTTGAATGTCATTCACCTTGTGCAGTATCAGCACTACTACACCTCTCTGCTTAAGCATGTAGCTCCTGAAAGCTACAAGCAAGTTAATGAGATCAATACAGAGAATGCCCCTACGGGATCCATTGATGAAGTTCTTCAAAACATGGACCAAAATCTCTTACGAACTTTGCCTAAACTGGTCCCTAAACCTAGAATGTTAGTTTGTGCTCCTTCTAATGCTGCCACTGATGAGCTTCTTGCCCGTGTCCTTGATCGTGGATTTATTGATGGAGAGATGAAAGTATATCGACCTGATGTAGCTCGAGTAGGGGTTGATTCTCAGACACGAGCTGCCCAAGCAGTTTCTGTTGAGCGGAGAACTGAACAGCTTCTGGTGAAGAGTCGGGAAGAAATTGTGGGATGGATGCATCAGTTAAAGACTCGTGAATCACAGTTGACTCAGCAGTTACATTGTCTTCATAGAGAACTAAATGCTACTGCTGCTGCTGTTCGCTCCCAAGGATCTGTTGGTGTTGACCCTGACCTTCTCATGGCTCGAGATCAGAATCGAGATGCTTTGCTACAGAACCTTGCAGCTGTGGTTGAAAACAGGGATAAGATTCTGGTTGAGATGTCTCGCCTTGCCCTTTTGGAAAGTAGGTTTCGACCTGGTAGTGGTTTCAATTTGGAAGAGGCCCGTGCTAGTTTGGAGGCCAGTTTTGCCAATGAAGCTGAGATAGTTTTCACTACAGTTTCTAGCAGTGGTCGCAAGCTGTTTTCTCGTCTTTCCCATGGTTTTGATATGGTGGTCATTGATGAGGCAGCCCAAGCCAGCGAGGTGGGAGTTCTGCCTCCCCTCTCTCTTGGTGCAGCACGATGTGTTCTTGTTGGAGATCCTCAGCAGCTTCCTGCTACAGTTATCAGCAAAGCTGCAGGAACATTGATGTACAGTAGGAGTCTTTTTGAAAGGTTCCAACAAGCAGGATGCCCCACAATGTTGCTGTCTGTGCAGTATAGAATGCATCCCCAAATTCGAGATTTTCCTTCTAGATACTTCTATCAGGGGCGCCTTACTGATAGTGAGAGCGTGGTCAAATTGCCCGATGAAGCATACTACAAGGACCCTTTACTTAGACCTTATTTATTCTATGACATCAGACATGGGCGGGAGTCTCACAGAGGTGGATCAGTCTCTTATCAAAACATACATGAAGCACAATTTTGTCTCCGATTGTATGAGCATGTTCAGAAAACAGTGAAATCTTTGGGTGTGGGAAAGATTACTGTTGGCATAATTACTCCTTACAAGCTGCAGCTGAAATGCCTCCAACGAGAGTTTGAGGAAGTCTTGAATTCAGAAGAAGGGAAGGATCTGTATATCAATACAGTAGATGCTTTCCAAGGTCAAGAACGTGATGTCATTATAATGTCTTGTGTGCGTGCATCCAGTCATGGGGTTGGCTTTGTTGCAGATATACGTCGAATGAATGTTGCCCTTACACGTGCAAGAAGGGCCCTTTGGGTCATGGGAAATGCAAATGCTCTGGTGCAATCTGAGGATTGGGCTGCTTTGATTGCAGATGCAAAATCCCGACATTGTTATATGGACATGGACTCTCTTCCTAAGGACTTTTTGGTGACCAAGGGACCTCCTTACACGCCATTGCCTGGTAAGGCTCCCTTGAATATGAGGGGCTTGAGATCAGGTGGACCACCAAGGTATAGATCAATGGACATGCATATGGAATCCAGGTTGGGAGCACCCTCTGAAGATGATGAGAAGATGATGAGTGCTTCAGCAAGCTTCAGAAATGGGAACCATCGTCCATCAAGGTATTCAATGGAGAATTCCTTAGATGATTTTGATCATTCGGGTGATAAATCTAGAGATGCCTGGCAGTATGGCATACAGAAGAAGCAGAACTCTGCTGGAACCTTGGGAAAAAGAGACGTATAG 4248 0.4475 MGSRGRPIFDLNEPPTEDNDERDGSFCFHPQITHPSTNPHASDILVASTAAQGIKNNHAFSHASSVSGFQPFVRPKPDADAEPKRAGDQDAKASSKSSKDEDVKVMDSRIFSSTNAQSTEREEGEWSDQEGFTDANGGNNLLKQSQTSEEQTTSGMVDGCVAVASDSKSSNIRSSDSINDEKSSHVSIGIESNSSEQKSNGIPNSESNVKSEAVIDAQEEPSAVPKQKEVKGIEASHALKCANNPGKRKIDQRKEEMLGKKRNRQTMFLNLEDVKQAGPIKTSTPRRQTFASPVITRTVKEVRTVPAQVERTAIAKDQKQVDPSFGEGGTQAEAHEPKSDCNGDYSGLLGRSRRINSEMEPPTEVNFPPIPRQGSWKQPTDSRQQKNALISSRKLGQSGQGSSDVKLGNKKHLSIKKQTPVSVQSQDTSVERLIREVTSEKFWHHPVITLRVITLERHAKVMIVVFGMKFDIGLIASTGLHEFIISCDTEETELQCVPGRFESVEDYVRVFEPLLFEECRAQLYSTWEEAKETVSRDTHIMVRVKANESRERGWYDVKVIPVHEFKWSFKEGDVAVLSSPRPGSVRSKQNSSSLVQDDGESEITGRVVGTVRRHIAIDTRDPPGAILHYYVGDSYDPSRVDDDHIIRKLQIGSIWYLTVLGSLATTQREYIALHAFRRLNVQMQTAILHPSPEHFPKYEQQTPAMPECFTQNFVEYLRRTFNEPQLAAIQWAAMHTAAGTSSGTTKRQEPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKQVNEINTENAPTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERRTEQLLVKSREEIVGWMHQLKTRESQLTQQLHCLHRELNATAAAVRSQGSVGVDPDLLMARDQNRDALLQNLAAVVENRDKILVEMSRLALLESRFRPGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVGVLPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYFYQGRLTDSESVVKLPDEAYYKDPLLRPYLFYDIRHGRESHRGGSVSYQNIHEAQFCLRLYEHVQKTVKSLGVGKITVGIITPYKLQLKCLQREFEEVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALVQSEDWAALIADAKSRHCYMDMDSLPKDFLVTKGPPYTPLPGKAPLNMRGLRSGGPPRYRSMDMHMESRLGAPSEDDEKMMSASASFRNGNHRPSRYSMENSLDDFDHSGDKSRDAWQYGIQKKQNSAGTLGKRDV* 1416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01846 1415 Gene3D - 1102 1308 IPR027417 -
Rops4g01846 1415 MobiDBLite consensus disorder prediction 580 599 - -
Rops4g01846 1415 PANTHER DNA2/NAM7 HELICASE FAMILY 251 1358 IPR045055 -
Rops4g01846 1415 FunFam P-loop containing nucleoside triphosphate hydrolase 1102 1308 - -
Rops4g01846 1415 MobiDBLite consensus disorder prediction 311 408 - -
Rops4g01846 1415 Gene3D - 658 1101 IPR027417 -
Rops4g01846 1415 CDD SF1_C_Upf1 1104 1293 IPR047187 -
Rops4g01846 1415 MobiDBLite consensus disorder prediction 1 41 - -
Rops4g01846 1415 MobiDBLite consensus disorder prediction 1377 1397 - -
Rops4g01846 1415 MobiDBLite consensus disorder prediction 132 155 - -
Rops4g01846 1415 MobiDBLite consensus disorder prediction 1320 1342 - -
Rops4g01846 1415 Pfam AAA domain 1080 1276 IPR041679 -
Rops4g01846 1415 MobiDBLite consensus disorder prediction 373 407 - -
Rops4g01846 1415 MobiDBLite consensus disorder prediction 65 230 - -
Rops4g01846 1415 CDD DEXXQc_SETX 721 1103 - -
Rops4g01846 1415 MobiDBLite consensus disorder prediction 1365 1415 - -
Rops4g01846 1415 MobiDBLite consensus disorder prediction 11 27 - -
Rops4g01846 1415 MobiDBLite consensus disorder prediction 164 212 - -
Rops4g01846 1415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 720 1305 IPR027417 -
Rops4g01846 1415 Pfam AAA domain 727 1073 IPR041677 GO:0004386
Rops4g01846 1415 MobiDBLite consensus disorder prediction 77 107 - -
Rops4g01846 1415 MobiDBLite consensus disorder prediction 582 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01846 Rops-Chr4 43096050 43103777 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01846 - K10706 gmx:100794516 2406.71