Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01812 ATGGCAACTGCAACCATGGCTACTGCGGCAGGTGCAGCTGCTCTTTTGTACTACACATTGAATAGGAAATTGCAGTCTCAAAGCACAATCAATGAAGATGGTGAAGAAAATGGCAATGATGCACACACTGATGTGGCATTAGGTATTGACCGTGTTTCTACTCGGTTAATCCAAGCCCCTGCTACATGGTTGGAGACAATTTCAACATTGTCAGAGACTCTTAGGTTCACGTATTCGGAGACACTTGGGAAATGGCCAATTGGGGATTTGGCATTTGGTATCAGCTTTCTTCTGAAGAGGCAGGGAAATTATCATGTTGACAGTGTTTTTGGTGGTAAGGACAGTGTAAGGCTGAAAGGATCTGAGATTACTGCTGAACTTAAGTATCTATTAAACTTGTTGACACTATGTTGGCATTTTTCGAAGAAGCCTTTTCCCTTGTTTCTAGAAGAAACTGGCTACACTGAAGAAAATGTTCTCCTTAGGGAGGCGAAAGCAGGAATTTTGAAACCGGCATTTACAATAATAGCTGATCACAAGATGAGGTGCTTCTTGTTATTGATTCGTGGCACGCATAGTATCAAAGATACTCTAACAGCTGTTACAGGAAATGTGGCACCATTTCATCACACTGTAGTTCAGCAGGGGGGTGTTAGTGATTTGGTTTTAGGTTATGCGCATTGTGGAATGGTTGCTGCCGCTCGTTGGATTGCAAAACTTGCAACTCCTTGTCTCCTTGAAGCACTCAGCCACTACCCTGACCATAAAGTTAAGATTGTAGGGCACTCTTTGGGTGGAGGCACAGCTGCAATTCTAACGTATATATTAAGAGAGCAAAAGGAGTTGTCTGTGACTACATGTGTTACATTTGCTCCAGCTGCTTGTATGACATGGGAGTTGGCAGAGTCAGGCAATAGTTTTATTACTTCTGTTATAAATGGAGCTGATTTGGTGCCTACATTCTCAGCTGCTTCTGTGGATGACTTGCGTTCTGAGGTGACAGCATCAGCATGGATAAATGACTTGAGGAATCAAATTGAACAAACAAGAATACTGAGTACTGTCTATCGTTCTGCTTCAGCATTGAGTTCTCGCCTTCCATCTATTGCCAGTGCTAAAGCAAAAGTTGCTGGGGCTGGGGCAATTTTGCAGCCGGTTTCTAATGGTACCCAGGTTGTGATGAAAAGGGCCAAGAGTATGGCTCAGGCAGCATGGACACGTCCAAACCTTAACCTGTCCTCTTGGTCATGCATGGGACCCCGTCGCCGAGCTGTGGTGGTTCATTCAAACTCCAAAGATGAAGGAAGTTCCCCTAAATCTTCAGCCTCAGACGATGTAGAAAGTGCTGATCCACTTCTTTGTTCTTCCAAGAAGGGGATTAACGCCAAGAGCATGAACCTTCCTGTATCTTCATCTGTGGAAGAGTGGTCCTCTGAAATTGAATGTGCTCATGAAAGTAGTCTGGATACTGATGGGGATGTTGATCTCAATGACCTCGAGAACATGACGGACCATGAAAGATATGAAGATCAGGTGAGTGAAGTGGAGTTATGGCAACAACTAGAACATGAGCTGTATGACAGACCTGAAGGTGAGGAGTCTGATGTGGCAAAGGAGATAAGGGAAGAGGAAGCAGCCATAACTGAGGAAGTAGGGCAAACCCAAATCTCTGAACCAGAAATGAAAGAAGTTCACAGATTTTTTCCTCCCGGAAAGATAATGCACATTGTTACACTCCACTCTGATGCTGCGGAGCATGAAAATGATGGTAGCCCGACCTCTACAAGTTCTGATAACAGCCAGCCAGAAGAGACTAAGATTGGGATTTTCCTCACTTCAAGGTCTCTATATAGTAAGCTTAGACTTTCACAGACCATGATCAGTGATCACTTCATGCCAGTTTATAGAAAGCAGATGGAAAGGCTAATTAAAGAACTTGAGGAAGAATCTACTGAGGATCATAAAACACAAGAAGAAGTGTTATAG 1986 0.4366 MATATMATAAGAAALLYYTLNRKLQSQSTINEDGEENGNDAHTDVALGIDRVSTRLIQAPATWLETISTLSETLRFTYSETLGKWPIGDLAFGISFLLKRQGNYHVDSVFGGKDSVRLKGSEITAELKYLLNLLTLCWHFSKKPFPLFLEETGYTEENVLLREAKAGILKPAFTIIADHKMRCFLLLIRGTHSIKDTLTAVTGNVAPFHHTVVQQGGVSDLVLGYAHCGMVAAARWIAKLATPCLLEALSHYPDHKVKIVGHSLGGGTAAILTYILREQKELSVTTCVTFAPAACMTWELAESGNSFITSVINGADLVPTFSAASVDDLRSEVTASAWINDLRNQIEQTRILSTVYRSASALSSRLPSIASAKAKVAGAGAILQPVSNGTQVVMKRAKSMAQAAWTRPNLNLSSWSCMGPRRRAVVVHSNSKDEGSSPKSSASDDVESADPLLCSSKKGINAKSMNLPVSSSVEEWSSEIECAHESSLDTDGDVDLNDLENMTDHERYEDQVSEVELWQQLEHELYDRPEGEESDVAKEIREEEAAITEEVGQTQISEPEMKEVHRFFPPGKIMHIVTLHSDAAEHENDGSPTSTSSDNSQPEETKIGIFLTSRSLYSKLRLSQTMISDHFMPVYRKQMERLIKELEEESTEDHKTQEEVL* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01812 661 Pfam Lipase (class 3) 186 323 IPR002921 GO:0006629
Rops4g01812 661 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 6 650 - -
Rops4g01812 661 MobiDBLite consensus disorder prediction 588 604 - -
Rops4g01812 661 MobiDBLite consensus disorder prediction 584 604 - -
Rops4g01812 661 CDD Lipase_3 178 322 - -
Rops4g01812 661 Gene3D alpha/beta hydrolase 148 363 IPR029058 -
Rops4g01812 661 Pfam Lipase 3 N-terminal region 51 130 IPR005592 GO:0016042
Rops4g01812 661 MobiDBLite consensus disorder prediction 427 449 - -
Rops4g01812 661 MobiDBLite consensus disorder prediction 430 444 - -
Rops4g01812 661 Coils Coil 632 659 - -
Rops4g01812 661 SUPERFAMILY alpha/beta-Hydrolases 146 323 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01812 Rops-Chr4 42487212 42493865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01812 15 649 Acyl Lipid Metabolism Gene Families AT3G14075 64.130 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01812 - - gsj:114390808 1072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01812 4 42487212 42493865 Rops4g01812 4 42487212 42493865 ECH