Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01809 ATGAGACCCCCTTTTGTTGGATTCATCAGAATACTTATCTTTCTTGTTTTCATCTCAGCTTGCTGTTTCAGTTCTGCTACCCAAGGAAGTACAAAAATGGAGAGAACTTTAGCCATTATAAAACCTGATGGATTACTTGGTAACTACACAGATGATATCAAGAGAACAATTTTAGAATATGGTTTCAGCATTTTGAAGGAAAAGATTGTTCAACTTGATGAGGCCACTGTGAAAAGATTTTATGCAGAGCACTCTTCAAAAAGCTTCTTTTCCAGCCTTATAAAATACATGACAAGTGGACCAGTGTTAGTTATGGTTTTGGAGAAGGATAATGCTATTGCTGATTGGCGTGCTTTAATGGGCCCTACTGATGCAAGCAAGGCTAAGATTACTCACCCTCACAGCATCAGAGCAAAATGTGGATTGGATACCGAAAAGAATTGTGTTCATGGTTCAGACTCGCCCAAATCTGCACAAAGAGAGATACCATTTTTCTTCAGCGAGCTCTCTGCAGATGTAATTGCAGAACATGATGAATTGTAG 543 0.3886 MRPPFVGFIRILIFLVFISACCFSSATQGSTKMERTLAIIKPDGLLGNYTDDIKRTILEYGFSILKEKIVQLDEATVKRFYAEHSSKSFFSSLIKYMTSGPVLVMVLEKDNAIADWRALMGPTDASKAKITHPHSIRAKCGLDTEKNCVHGSDSPKSAQREIPFFFSELSADVIAEHDEL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01809 180 FunFam Nucleoside diphosphate kinase 30 178 - -
Rops4g01809 180 PRINTS Nucleoside diphosphate kinase signature 80 99 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Rops4g01809 180 PRINTS Nucleoside diphosphate kinase signature 36 58 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Rops4g01809 180 PRINTS Nucleoside diphosphate kinase signature 100 117 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Rops4g01809 180 PRINTS Nucleoside diphosphate kinase signature 147 166 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Rops4g01809 180 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Rops4g01809 180 SUPERFAMILY Nucleoside diphosphate kinase, NDK 32 169 IPR036850 -
Rops4g01809 180 Gene3D - 32 177 IPR036850 -
Rops4g01809 180 ProSitePatterns Nucleoside diphosphate kinases active site. 147 155 IPR023005 -
Rops4g01809 180 Pfam Nucleoside diphosphate kinase 34 168 IPR034907 -
Rops4g01809 180 Coils Coil 170 180 - -
Rops4g01809 180 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 16 176 - -
Rops4g01809 180 SMART ndk_5 33 173 IPR034907 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01809 K20790 - gmx:100500470 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01809 4 42404307 42407334 Rops4g01809 4 42404307 42407334 ECH