Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01784 ATGAGCAACGTGGATTTGACTGCTGCAGTTAACACTCTGTTAAATTTTCCTGAAACAATGGAAAAATTCATGTTTCCATCACGGGCTCATGATAATCAAGAGAACAGAGGAGTTTCTAGTACCCCAGTGGACATTTTGGACACTCCTAAGGAGTATATATTCTTCATGGATGTTCCTGGTCTTCCCAAGTCTGAAATTCAGGTGACAATTGAAGATGAGAACACACTTGTTATAAGAAGCAATGGGAAAAGGAAACGCCAAGATGGTGAGGATGAAGGGTGCAAGTACCTTAGGTTGGAAAGGAGAGCACCTCAGAAGTTGCTGAGGAAGTTCCGTTTGCCTGAGAATGCCAATTTGTCAGCAGTCACTGCTAAATGCGAGAATGGGGTCCTGACTGTGAATGTAGAGAAGCACCCTCCACCTCCAAAATCCAAAATAGTTGAAGTTGCCATTGCCTGA 459 0.4336 MSNVDLTAAVNTLLNFPETMEKFMFPSRAHDNQENRGVSSTPVDILDTPKEYIFFMDVPGLPKSEIQVTIEDENTLVIRSNGKRKRQDGEDEGCKYLRLERRAPQKLLRKFRLPENANLSAVTAKCENGVLTVNVEKHPPPPKSKIVEVAIA* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01784 152 Gene3D - 4 151 IPR008978 -
Rops4g01784 152 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 34 152 IPR002068 -
Rops4g01784 152 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 9 148 IPR031107 -
Rops4g01784 152 SUPERFAMILY HSP20-like chaperones 14 145 IPR008978 -
Rops4g01784 152 FunFam 17.4 kDa class III heat shock protein isoform A 3 150 - -
Rops4g01784 152 Pfam Hsp20/alpha crystallin family 44 149 IPR002068 -
Rops4g01784 152 CDD ACD_sHsps-like 44 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01784 Rops-Chr4 42105949 42107320 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01784 K13993 - gmx:100803161 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01784 4 42105949 42107320 Rops4g01784 4 42105949 42107320 ECH