Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01779 ATGGAGTTAGCAAAGGAAAAGCTGCAGAGTAGTGTTGTTGTTGCAGATGGAGCTGACCCCATGTCTTGTTTCATGCAGAAGTTCAGGCTCTATGAAACTCGCTCGAAATTTTATATGATTGGAAGAGACAAAAACAGAACAATTTGGAGGGTCTTAAAGATTGACAGATTGGAGCCGTCTGAATTAAATATCATGGAAGATTCAACAGTATACTCAGAAATTGAGTGTTGTGACCTTCTGAGGCGGATACATGAAGGAAACAAGTCAACAGGGGGGCTTAAATTTGTGACTACGTGCTATGGAATCATCGGATTTATCAAATTTCTTGAGCCATACTACATGCTGCTTATAACAAAACGAAGGAAGATTGGCACAATATGTGGGCACACCATATATGCTATCACAAAGAGCGAAATGATTCCTATTCCACATGCAACCGTGCGATCCAAAATGGCATATTCAAAGGATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGATCTTACGAAGGACTTCTTTTTCAGCTACTCATACAATATCATGCTTAGTCTTCAAAAGAACATATCTGATCATAATACTATGGGACAATCACTTTATGAAACGCTGTTTGTTTGGAATGAGTTCTTAACTCGTGGAATCAGGAATAATCTCCAGAATTCTTCTTGGACAGTTGCCTTAGTGTATGGCTTTTTTAAACAGGTCAAACTTTCTATATCAGGCAACGAGTTCAACTTGATCATCATTGCTAGGCGTTCAAGGCATTATGCTGGGACCAGATATTTGAAACGAGGAGTGAATGAAAAGGGTAGAGTAGCTAATGATGTTGAGACAGAGCAGATAGTCTTTGCAGATTCTCGTGATGGACTCCCAATGCAAATCAGTTCTGTGGTGCAGATCCGAGGTTCAATCCCTCTGTTCTGGTCTCAGGAAGCCTCTCCATTGAATATAAAACCTGACATTATATTATCAAGAAAGGACTGTAGTTTTGAAGCCACAAGACTTCATTTTGAAAATCTCGTCAAGAGATATGGAAATCCAATTATTATATTGAACTTGATTAAGACACGTGAGAAGAAGCCTCGAGAAACTATTCTGCGAGCCGAGTTTGCTAATGCTGTTCGGTCTATTAATACAAATTTGGGAGGGGAAAATCGCCTGAGGTTCCTTCATTGGGATTTGCATCGGCACTCAAGATGCAAAGCTACCAATGTGTTGGGACAGCTGGGAAAAGTGGCTGCATATGCATTGAAGCTAACTGGCATCTTCTACAGTCCAGTGACACCAAATTTGAGGTTCAAGGGATTATTACAATATTCCTACTCTGAGAATAACAATGTTATTGATCCTGCCGTTGCGGAAGAAGCTTGTATAAACAAGGATAATGTTGATAAGGAAACAGAAGTTAGCAATTGTTACTATGGTGGTAATGAAAACAAAGATTACGGTGTCAAACCCCAAATGCTTCAAGCAGGGGTCTTGAGGACTAATTGCATAGACTGTTTGGATCGTACAAATGTTGCACAGTTTGCTTATGGCCTAGCTGCACTTGGACGTCAACTACAAGTTATTGGATTTATTGAATCCCCATATATTGATCTTGATAACCCTTTGGCAAAGGAATTAATGGCAGTCTATGAGTCCATGGGTGACACATTAGCCTTTCAATATGGGGGTTCTGCAGCGCACAATAAGATATTTTCTGAGAGAAGAGGTCAATGGAAGGCAGCAGCACAATCCCAGGAATTTATTCGAACCCTCCAACGTTATTACAACAACACATATTTGGATGGTGATAAACAAAAAGCAATTAACATATTCTTGGGGCATTTTCAGCCACAACAGGGAAGACCAGCACTGTGGGAGCTAGATTCTGATCAGCATTACACTGTTGGGAAACGTGGCCCATTAGCAGATGACAGTGTTAGGTCAACTATTAAAAGATCGCTATCGGATGGCAACATTCTGGGTGATAGTGACCCTACAATTAGGAACTTGAATGCTACAAGTTGTCAGCACTCATCTGAAAAACCTGATAAGCAATGTCGTTTGGACTCGGCTCCGGACATCTTTACCTGTGGAAGTGCTATTTGTCATTGCAGGCAGATATATGGAGGAATGGTCAAGGACCAATGTTCTGATAGTAATCACATCTGTTATGATGAACATGGAGATGCATGTGACTGCTCCAATTTCGTTGATGTGGACTGGCTTTCTTCTTCTGGAAATTCTTGTGAAGAGGAATTACTTGAAAGGTCAACCAGCATCTCCTCAGATAATATTGTGAATGAACTAATAACTGAGATATCTGCAAGTGAATCTGGATCCAGCCTGAAGGTCAGTGGGAGGCAGAGTGGAGAAGAACTCAACAAAGATGGCAAATACACTGAAAGCTTTGAACTCAAAAAAGATGGCAAATACACTGAAAGCTTTGAACGTTGGGTGACTCATGGGGAGATACTTTTTGTTTGA 2472 0.4061 MELAKEKLQSSVVVADGADPMSCFMQKFRLYETRSKFYMIGRDKNRTIWRVLKIDRLEPSELNIMEDSTVYSEIECCDLLRRIHEGNKSTGGLKFVTTCYGIIGFIKFLEPYYMLLITKRRKIGTICGHTIYAITKSEMIPIPHATVRSKMAYSKDENRYKKLLCSVDLTKDFFFSYSYNIMLSLQKNISDHNTMGQSLYETLFVWNEFLTRGIRNNLQNSSWTVALVYGFFKQVKLSISGNEFNLIIIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFADSRDGLPMQISSVVQIRGSIPLFWSQEASPLNIKPDIILSRKDCSFEATRLHFENLVKRYGNPIIILNLIKTREKKPRETILRAEFANAVRSINTNLGGENRLRFLHWDLHRHSRCKATNVLGQLGKVAAYALKLTGIFYSPVTPNLRFKGLLQYSYSENNNVIDPAVAEEACINKDNVDKETEVSNCYYGGNENKDYGVKPQMLQAGVLRTNCIDCLDRTNVAQFAYGLAALGRQLQVIGFIESPYIDLDNPLAKELMAVYESMGDTLAFQYGGSAAHNKIFSERRGQWKAAAQSQEFIRTLQRYYNNTYLDGDKQKAINIFLGHFQPQQGRPALWELDSDQHYTVGKRGPLADDSVRSTIKRSLSDGNILGDSDPTIRNLNATSCQHSSEKPDKQCRLDSAPDIFTCGSAICHCRQIYGGMVKDQCSDSNHICYDEHGDACDCSNFVDVDWLSSSGNSCEEELLERSTSISSDNIVNELITEISASESGSSLKVSGRQSGEELNKDGKYTESFELKKDGKYTESFERWVTHGEILFV* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01779 823 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 17 774 IPR043573 GO:0043813|GO:0046856
Rops4g01779 823 ProSiteProfiles Sac phosphatase domain profile. 164 559 IPR002013 GO:0016791
Rops4g01779 823 Pfam SacI homology domain 100 398 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01779 Rops-Chr4 42071068 42082756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01779 25 821 Acyl Lipid Metabolism Gene Families AT5G20840 55.772 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01779 K22913 - gmx:100806380 1400.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01779 4 42071068 42082756 Rops4g01779 4 42071068 42082756 ECH