Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01758 ATGCCACTTTCTTTCCAAAATGTGGTTGAGCAGCTTCAAGTTCTCAACCTCGACAGGCTTAATCTGGATGGGTTGGATCCTTCCAAGGCAGTGGTAAATGGCCAAATCGCTGAAGTCCCGGATGACGAGGAAGAAAATCCTAGAGCTGAACAAACTGGGGAAAACTGTGAAAATCTAAAAATGGGTTTGCCACTGAGAGTTTCGAGAGAGAGGACTAGTAAGACTAACCAAGGTTCACCAAAGAAACTTCCTTTACCTCCAATCAGTGGCCCCAGTAAGCTCAAACCATTTTCCATGGACCTCCCCCGCCACAACTTCTTTCAAGCTTCATCTTTATTGGTACCACATGGGGAATCAGCTATTGAGAGGAACATGAGCTTATATGGGAAAAGCAAAGACAAGAATCCATTTGTAGATGACTCCTTCCCTGACCCACTTTGCAAGTTCAATCTCAAGGAAACCTCGGAGTTTGTGAAGTCACTTCCTCCAGTGTCAAATGTTAATGCAGAAAGCAGAAACTTTCTTGAGGTTTCAGCACAGGGAGAAAGAGGCAATGACTCTGTGACACAACAGAGGAGACTTGAGGCTCCATCCACACCTGGTAGACCTGTTTTCTGCTTCAGTTCTGGTGTTGGAAGGAACCTTTCAAGAAAGAGTGTCCCTTCTAAATGGGATGATGCAGAGAAATGGCTCATGAGTAGCTCATGCCATGAGTCACCTGCTCATAACAACACTGTGAAGGGATCAGAATCCTCAAAGATTAGTAGCAGACAATGTGATAACTTTAAGGTGCAAATGGAGGATTTCTCGGAGAAATTGAGGGTCACAGAAGAAAGGGTGTCCAAAGCTGTCCCTAATGTCCTAAAGTTTTCATCTTTGGACCACCATAACACAGTTGGCGCCTTCAATGGGGTCTCATGCCCAACAGACATAGTACTAAAAGATAAGTTCACAGACAGCGTAGAGCCCATTTTGCCAAATTTCAGATATTTGGAGCCAACTAAAGAAGGGTTCTTGTTTAGAAACCCAGCTAGTGAGGCAATGCAAGATGCTTACACAGAAATGGTTCATGAGGTTCAACATAGAGATGTTGGAACAGAGATGACTCCTTTAGGAAGTTCAACAACTTCAAGATGTCACACCCCATTTAAGAGTTCATCCCCAGCTCGCCATAACACTCCTGCAAATAGGTCAGGACCATTGGCATTGCTTAGCCCCAATAGCACTGGTTGCCCTGTTGAAGCTATCCAGCTGGAGGAGTGCCATTTTTCTAAACTTCAACTAGGCACACAGTATGATTTAGCCACCTCAAATTGGAGCTCAAGTGAAGAGGAAGAAAAGGAAATATCAAAAAGCTTGAGACATAATTCTAGCCAGAAAGCTGATTCAGATTACATAGCTGCTGCATGGGAAGAAGAGGAGAAGACCAAGTGCTGTCTCAGGTATCAGAGAGAAGAAGCAAAAATCCAAGCTTGGGTAAACCTTCAAAATGCTAAAGCAGAAGCTCAATCAAAAAAGCTAGAGGTGAAAATTCAAAAGATGAGAGCAAAGCTTGAAGAGAAGTTGATGAAGAGGATGTCAGTAGTTCACAGGAAAGCTGAGGAATGGAGAGCAACAGCAAGACAACAGCATTTGGAGCAAATGCAAAAAGCCACTGAACAAGCTCAAAAGAGGATCTATGGGCATAACTCACAATTTTCAAGGCACAGTTCATGTGGTTGCTTCCCTTGCAACAACAACAACCATAATTAA 1752 0.4349 MPLSFQNVVEQLQVLNLDRLNLDGLDPSKAVVNGQIAEVPDDEEENPRAEQTGENCENLKMGLPLRVSRERTSKTNQGSPKKLPLPPISGPSKLKPFSMDLPRHNFFQASSLLVPHGESAIERNMSLYGKSKDKNPFVDDSFPDPLCKFNLKETSEFVKSLPPVSNVNAESRNFLEVSAQGERGNDSVTQQRRLEAPSTPGRPVFCFSSGVGRNLSRKSVPSKWDDAEKWLMSSSCHESPAHNNTVKGSESSKISSRQCDNFKVQMEDFSEKLRVTEERVSKAVPNVLKFSSLDHHNTVGAFNGVSCPTDIVLKDKFTDSVEPILPNFRYLEPTKEGFLFRNPASEAMQDAYTEMVHEVQHRDVGTEMTPLGSSTTSRCHTPFKSSSPARHNTPANRSGPLALLSPNSTGCPVEAIQLEECHFSKLQLGTQYDLATSNWSSSEEEEKEISKSLRHNSSQKADSDYIAAAWEEEEKTKCCLRYQREEAKIQAWVNLQNAKAEAQSKKLEVKIQKMRAKLEEKLMKRMSVVHRKAEEWRATARQQHLEQMQKATEQAQKRIYGHNSQFSRHSSCGCFPCNNNNHN* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01758 583 MobiDBLite consensus disorder prediction 367 403 - -
Rops4g01758 583 MobiDBLite consensus disorder prediction 179 196 - -
Rops4g01758 583 Pfam Remorin, C-terminal region 467 557 IPR005516 -
Rops4g01758 583 MobiDBLite consensus disorder prediction 435 455 - -
Rops4g01758 583 CDD UDM1_RNF168_RNF169-like 501 557 - -
Rops4g01758 583 Coils Coil 259 279 - -
Rops4g01758 583 Coils Coil 495 524 - -
Rops4g01758 583 MobiDBLite consensus disorder prediction 179 199 - -
Rops4g01758 583 MobiDBLite consensus disorder prediction 440 455 - -
Rops4g01758 583 MobiDBLite consensus disorder prediction 38 89 - -
Rops4g01758 583 PANTHER OS02G0116800 PROTEIN 184 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01758 Rops-Chr4 41684688 41695217 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01758 - - gmx:100776089 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01758 4 41684688 41695217 Rops4g01758 4 41684688 41695217 ECH