Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01753 ATGAGAGAACCAAGAGATGCAACCAAATCCGAGAGAACCTCGAAATCTGCATCATCCCCTGCTTCCTTCCCTCTCATTCTCGACATCGACGATTTCAAGGGAGATTTCTCGTTCGATGCGTTATTCGGTAACCTAGTGAACGATCTTCTTCCGTCGTTCAAAGTAGAAGAAGCTGAATCGGACGGTGGTGATTCACTTCCGAACGGTCATCACAGACGAGCGCCGTCTGATTCGGCCAAGTACTCGCAGGGACTTTCGAGTCCTTTGTTCCCAGATGTTGAGAAGCTTTTGTCTTTGTTCAAGGATTCTTGTAAGGAGCTGCTTGAGCTTCGTAAACAGATTGATGGGAGACTCTATAATCTTAAGAAAGATGTTTCTGTTCAAGATTCTAAACATCGAAAGACACTTGCTGAGCTAGAGAAAGGTGTAGATGGATTGTTTGATAGCTTCGCGAGGTTGGATTCGCGTATTTCAAGTGTTGGCCAGACTGCTGCTAAGATAGGAGATCATCTCCAGAGTGCAGATGCTCAGCGAGAAACAGCCAGTCAAACAATTGAGCTGATAAAATACTTGATGGAGTTCAATAGCAGCCCAGGCGATCTGATGGAGCTTTCACCTCTTTTTTCTGATGATAGTCGTGTAGCTGAGGCCGCTTCAATTGCCCAAAAATTACGCTCATTTGCTGAAGAAGATATTGGAAGACATGGTATAGCTGTCCCATCAGCTGTGGGAAATGCAACTGCTAGCAGAGGATTAGAAGTCGCAGTTGCTAATTTACAGGACTACTGCAATGAACTGGAGAATAGATTGCTTTCTCGGTTTGATGCAGCATCACAGAAAAGAGAATTGACCACAATGGCAGAATGTGCCAAAATTTTGTCCCAGTTCAACAGGGGCACAAGTGCCATGCAACATTATGTGGCAACACGTCCAATGTTTATTGATGTGGAAGTAATGAATGCAGACACTAGACTGGTTCTTGGTGAGCAGGCTGCACAAGCTAGTCCTAGTAATGTTGCTCGTGGGCTTTCCTCCTTGTACAAAGAAATCACAGATACTGTTCGTAAAGAGGCTGCAACAATCACGGCTGTATTCCCTTCACCCAATGAAGTTATGTCTATTTTAGTTCAGCGAGTTTTAGAGCAACGAATCACTGCCCTTCTGGACAAACTGTTAGTGAAACCATCTCTTGTGAATTTACCTTCCATGGAGGAAGGTGGGCTCCTATTATATCTTCGAATGCTGGCAGTGACATATGAAAAGACCCAAGAACTTGCTAGAGATCTACAAGCTGTGGGATGTGGTGACTTGGACATTGAGGGTCTGACAGAGTCGTTGTTTTCAACTCACAAGGATGAATACCCTGAATATGAGCAGGCATCTCTTACACAATTATATAAAGTGAAGATGGAAGAACTGCGAGCTGAGAGCCAGCAGATTTCTGATTCATCCGGGACAATTGGACGCTCGAAAGGAGCGTCAGTAGCTTCTTCTCAGCAGCAAATATCCGTTACTGTTGTGACGGAATTTGTGCGTTGGAATGAAGAAGCAATCTCAAGATGCAATCTATTCTCTTCCCAGCCTGCTACACTTGCAACCAATGTAAAAGCAGTGTTTACTTGCCTGCTAGACCAAGTTAGTCAATATATAGCAGATGGGCTTGAACGGGCTAGAGACAGCCTGACTGAAGCAGCTACTTTGAGGGAAAGATTTGTGCTGGGTACAAGTGTTAGCCGTAGAGTGGCTGCTGCGGCTGCATCTGCGGCAGAGGCTGCTGCTGCTGCTGGTGAAAGTAGTTTCAGATCTTTCATGGTTGCTGTACAACGTTCTGGAAGCAGTGTAGCTATTATTCAACAATACTTTGCAAATTCTATATCTCGGCTTTTGCTCCCTGTGGATGGTGCACATGCTGCTGCTTGTGAAGAAATGGCTACAGCAATGTCCAGTGCAGAGGCAGCTGCTTACAAAGGATTACAACAATGCATTGAAACTGTCATGGCTGAGGTAGAGCGATTGCTTTCAGCTGAGCAAAAGACTACAGATTATCGATCACCTGATGATGGAATGGCTCCTGACCACCGGGCAACCACTGCCTGCGCAAGGGTTGTAGCTTATCTGTCTCGTGTGCTGGAGTCTGCATTTACTGCTCTAGAAGGTCTCAACAAACAAGCATTCTTGACTGAGTTGGGGAATCGCTTGCACAAGGTGCTGCTAAATCATTGGCAGAAGTATACCTTTAATCCAAGTGGGGGATTGCGACTGAAGCGTGACATTACCGAATATGGAGAATTTGTGCGTAGTTTCAATGCTCCTTCTGTTGATGAGAAATTTGAATTGTTGGGCATAATGGCCAATGTCTTTATTGTTGCTCCCGAGAGCCTTTCATCTTTGTTTGAGGGTACACCTAGCATTCGGAAAGATGCGCAAAGATTTATTCAACTTAGGGAGGACTTCAAGAGTGCCAAACTTGCATCCAAACTGAGTTCCTTGTGGGCTTAA 2499 0.4506 MREPRDATKSERTSKSASSPASFPLILDIDDFKGDFSFDALFGNLVNDLLPSFKVEEAESDGGDSLPNGHHRRAPSDSAKYSQGLSSPLFPDVEKLLSLFKDSCKELLELRKQIDGRLYNLKKDVSVQDSKHRKTLAELEKGVDGLFDSFARLDSRISSVGQTAAKIGDHLQSADAQRETASQTIELIKYLMEFNSSPGDLMELSPLFSDDSRVAEAASIAQKLRSFAEEDIGRHGIAVPSAVGNATASRGLEVAVANLQDYCNELENRLLSRFDAASQKRELTTMAECAKILSQFNRGTSAMQHYVATRPMFIDVEVMNADTRLVLGEQAAQASPSNVARGLSSLYKEITDTVRKEAATITAVFPSPNEVMSILVQRVLEQRITALLDKLLVKPSLVNLPSMEEGGLLLYLRMLAVTYEKTQELARDLQAVGCGDLDIEGLTESLFSTHKDEYPEYEQASLTQLYKVKMEELRAESQQISDSSGTIGRSKGASVASSQQQISVTVVTEFVRWNEEAISRCNLFSSQPATLATNVKAVFTCLLDQVSQYIADGLERARDSLTEAATLRERFVLGTSVSRRVAAAAASAAEAAAAAGESSFRSFMVAVQRSGSSVAIIQQYFANSISRLLLPVDGAHAAACEEMATAMSSAEAAAYKGLQQCIETVMAEVERLLSAEQKTTDYRSPDDGMAPDHRATTACARVVAYLSRVLESAFTALEGLNKQAFLTELGNRLHKVLLNHWQKYTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSSLFEGTPSIRKDAQRFIQLREDFKSAKLASKLSSLWA* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01753 832 MobiDBLite consensus disorder prediction 1 21 - -
Rops4g01753 832 PANTHER SEC10 25 821 IPR009976 GO:0005737
Rops4g01753 832 Coils Coil 249 269 - -
Rops4g01753 832 MobiDBLite consensus disorder prediction 58 84 - -
Rops4g01753 832 Pfam Exocyst complex component Sec10 144 484 IPR009976 GO:0005737
Rops4g01753 832 Pfam Exocyst complex component Sec10 492 826 IPR009976 GO:0005737
Rops4g01753 832 Gene3D - 665 827 - -
Rops4g01753 832 MobiDBLite consensus disorder prediction 58 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01753 Rops-Chr4 41610481 41621723 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01753 K19984 - gmx:100820430 1433.31