Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01748 ATGCAGATGGATTCGTCTTCCGACGAAGAAGACGACCGTCACAACCTCATTATCCAGAATGAGATGAAACCTCCGACTCCTCCCTCCGCCGCCGCATTCCACGTCGAAGATTTCAACTCGCGATTCCGGCGATTCAATTTCACGTTCAAGAAGAGATACATTCTCTTCATTTTCGTTCTCTCCATTGTTCTTCTCTTCTTCTCCGCCGCCGATCTCCGCCGCATATTCTCCACCACCTCCTCCCTCAGCTTCGATCCACTCTCCGATCGAATCAAGGAATCCGAATTGCGCGCCATTAACCTCTTGCGCCAACAACAACTAGCGCTTCTCACCGCTTTCAATCGCACGTTTCAATCCAATACTTCAGATCCGAATCCGAATTTGGAGGATCTGAAATCTTCGTTGTTCAAGCAGATTTCACTCAACAGAGAGATTCAACAGATTCTGTTGAATCCACATAAAACAGGGAACTCGGTTGAGCCTGAATTTGATTTCGGAAACCTTGATTTTGTCGATTTAAGTGATGATAGGTGTAGAACTGTGAATCAGAATTCTTCACAGAGAAGAACCATTGAATGGAACCCTAAAAATGATAAATTTTTGCTTGCTATATGCGTTTCAGGGCAAATGTCAAACCATTTGATTTGTTTGGCAAAGCACATGTTTTTTGCTGCAATTCTTAATAGGGTTTTGGTGATTCCAAGTTCCAAAGTGGATTACCAGTATGATAGAGTTATTGACATTGATCACATTAACAAATGCTTAGGGAAAAAAGTCGTGATTTCCTTTGAAGAATTCTCCAATGTTAAGAAGGATCATTTGCATGTTGGTAAGTTTCTGTGTTATTTTTCTCTGCCTCAACCTTGTTATTTGGATGATGAGCGTTTGAAGAAGTTGAGTTCTTTGGGTTTGTCAATGAGTAAACCTGAGGCTGTTTGGGATGAGGAAACAAGGAATCCTAAGAAGAAGACAGTTAAGGATGTTCAGTCTAAGTTTGATTATGATGATGATGTTATGGCTATTGGGGATTTGTTCTTTGCTGAAGTGGAGCAAGAATGGGTGATGCAACCAGGTGGGCCAATTGCTCACAAATGCAAGACTCTGATTGAACCTAGTCGCCTCATTTTGCTTACTGCTCAGCGTTTCATTCAGACATTCCTTGGAAGGAACTTCATTGCATTGCATTTTCGAAGACACGGGTTTTTGAAATTCTGTAATGCTAAAAAACCGAGTTGCTTTTACCCCATTCCTCAAGCTGCAGATTGCATCTTGAGGGTGGTTGAAAGGGCTGATGCACCGGTCATTTATCTTTCTACAGATGCAGCAGAAAGTGAAACTGGGCTGCTTCAGTCACTAGTTGTTCTGAATGGCAGGCTCGTTCCACTTGTAATACGCCCAGCTCGTAATTCGGCAGAAAAATGGGATGCTTTGTTATACAGGCACGGTATTGAGGGAGATTCACAGGTGGAAGCTATGTTGGACAAGACTATCTGTGCCATGTCTAGCGTGTTCATTGGAGCCCCTGGTTCCACTTTCACAGAAGACATCCTGCGGTTGAGAAAGGACTGGGGATCTTCATCAATGTGTGACGAGTACCTTTGCCAAGGTGAAGAACCAAATGTTGTAGCGGAAAATGAATAA 1641 0.4296 MQMDSSSDEEDDRHNLIIQNEMKPPTPPSAAAFHVEDFNSRFRRFNFTFKKRYILFIFVLSIVLLFFSAADLRRIFSTTSSLSFDPLSDRIKESELRAINLLRQQQLALLTAFNRTFQSNTSDPNPNLEDLKSSLFKQISLNREIQQILLNPHKTGNSVEPEFDFGNLDFVDLSDDRCRTVNQNSSQRRTIEWNPKNDKFLLAICVSGQMSNHLICLAKHMFFAAILNRVLVIPSSKVDYQYDRVIDIDHINKCLGKKVVISFEEFSNVKKDHLHVGKFLCYFSLPQPCYLDDERLKKLSSLGLSMSKPEAVWDEETRNPKKKTVKDVQSKFDYDDDVMAIGDLFFAEVEQEWVMQPGGPIAHKCKTLIEPSRLILLTAQRFIQTFLGRNFIALHFRRHGFLKFCNAKKPSCFYPIPQAADCILRVVERADAPVIYLSTDAAESETGLLQSLVVLNGRLVPLVIRPARNSAEKWDALLYRHGIEGDSQVEAMLDKTICAMSSVFIGAPGSTFTEDILRLRKDWGSSSMCDEYLCQGEEPNVVAENE* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01748 546 CDD O-FucT_like 362 520 - -
Rops4g01748 546 Gene3D - 365 534 - -
Rops4g01748 546 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2 81 546 IPR045130 GO:0036066|GO:0046922
Rops4g01748 546 FunFam O-fucosyltransferase family protein 365 534 - -
Rops4g01748 546 Pfam GDP-fucose protein O-fucosyltransferase 222 520 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01748 Rops-Chr4 41570849 41573463 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01748 K03691 - gmx:100776069 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01748 4 41570849 41573463 Rops4g01748 4 41570849 41573463 ECH