Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01734 ATGGGTGGAAAGAGGAAGAAGAGCGAAGATTCAGTAATCGATGATGCTGAAGAACCTTCGAAGAAGAAAACTCTAACGAAGAAGAAGAAGGAAGAGTTGCTTCCTTCAATGATCAAGAACAAGGACAAGAGATCAGAGGTACACGCCAAGCTCAAGCGTCAGAAGAAGCTCGAGAAGCGCTCTAAAGCAAAGGAACGTGACGCTGCTGTGAAGAGAGCTCTCGAGCTCGGTGAGGAGCCTCCGGAGAAGAAGGTTCCTCGTACCATTGAGAACACTAGGGAATTCGATGAGACCGTTTGCAAGCCCGATGATGAAGAGTTATTTGCTGGAATTGATGCTGATGAATTCAGTTCAATTTTAAAACGGGAGCAAACTCCGAAGATATTGATTACCACATGCCGCTTCAATTCAACAAGGGGACCTGATTTTATATCAGAATTGCTTTCAGTTATACCAAATGCACATTACTTCAAGAGAGGAACCTATGATTTAAAAAAGATTGTAGAATATGCAAAGAATAAGGACTTCACTTCTATTATAGTTGTTCACACCAATCGCAGGGAACCAGATGCTCTCTTAATCATTGGCTTACCTGATGGACCTACTGCTCATTTCAAACTCTCAAAGCTTGTTTTACGCATGGATATTAAGAATCATGGAAATCCAACCAGTCACAAACCTGAGCTTGTGTTGAATAACTTCACAACACGTCTGGGGCATCGAGTTGGAAGATTGATACAGTCACTTTTCCCACAAGATCCAGAATTTAAAGGCCGGCGAGTGGTCACCTTCCACAACCAGAGAGACTTCATATTTTTCCGGCATCATCGGTACATTTTTGAATCCAAAGAAATTAAAAACACTGAGTCTAAAGGTAAAAAGGACAAGGATGGCAAGAGTGAGAAGGTTCCTGAACAGAAAACAATTGCCCGTCTCCAGGAATGTGGCCCTCGTTTCACATTAAAATTGATCAGCCTGCAGCATGGAACATTTGACACTAAGGGTGGAGAATATGAGTGGACTCACAAGCCGGAAATGGACACAAGCCGAAGGAGGTTTTTCCTATGA 1068 0.427 MGGKRKKSEDSVIDDAEEPSKKKTLTKKKKEELLPSMIKNKDKRSEVHAKLKRQKKLEKRSKAKERDAAVKRALELGEEPPEKKVPRTIENTREFDETVCKPDDEELFAGIDADEFSSILKREQTPKILITTCRFNSTRGPDFISELLSVIPNAHYFKRGTYDLKKIVEYAKNKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRMDIKNHGNPTSHKPELVLNNFTTRLGHRVGRLIQSLFPQDPEFKGRRVVTFHNQRDFIFFRHHRYIFESKEIKNTESKGKKDKDGKSEKVPEQKTIARLQECGPRFTLKLISLQHGTFDTKGGEYEWTHKPEMDTSRRRFFL* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01734 355 ProSiteProfiles Brix domain profile. 126 332 IPR007109 GO:0006364|GO:0019843
Rops4g01734 355 MobiDBLite consensus disorder prediction 1 85 - -
Rops4g01734 355 Pfam Brix domain 137 324 IPR007109 GO:0006364|GO:0019843
Rops4g01734 355 MobiDBLite consensus disorder prediction 1 47 - -
Rops4g01734 355 MobiDBLite consensus disorder prediction 287 309 - -
Rops4g01734 355 SMART Brix_2 129 326 IPR007109 GO:0006364|GO:0019843
Rops4g01734 355 MobiDBLite consensus disorder prediction 287 308 - -
Rops4g01734 355 SUPERFAMILY Class II aaRS ABD-related 126 329 - -
Rops4g01734 355 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 34 355 IPR044281 GO:0006364|GO:0042134
Rops4g01734 355 FunFam Ribosome production factor 1 126 322 - -
Rops4g01734 355 Gene3D - 126 322 - -
Rops4g01734 355 MobiDBLite consensus disorder prediction 60 85 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01734 K14846 - gmx:100791194 619.387