Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01716 ATGGGGGCAGGGGCGGCACAAGAGTTTGTTAGGCCTAAAATCTCTCTGCTGTTTACTTTTGGTGTTGTCAAGATGAGTGAGAATGCTGAAGAATCTCAAGAAAGCCGCCCAGTTCCACGCTTGAATGAAAGGATTCTTTCATCTTTGTCAAGGAGATCAGTTGCTGCCCACCCTTGGCATGATCTTGAAATTGGACCTGGAGCTCCCCAAATTTTCAATTGTGTTGTGGAGATCACTAAGGGAAGTAAGGTCAAGTACGAACTTGACAAAAAGACTGGATTAATTAAGGTTGATCGGATTTTGTATTCATCAGTTGTTTATCCTCATAACTATGGTTTTATCCCTCGAACTCTCTGTGAAGACAACGATCCTCTTGATGTCTTGGTTCTCATGCAGGAGCCAGTTCTTCCTGGTTGTTTCCTGAGAGCCAGAGCCATTGGACTGATGCCCATGATTGACCAGGGGGAGAAGGATGATAAAATTATTGCAGTATGTGCTGATGATCCTGAGTATAAGCACTATACTGACTTCAAAGAACTTCCACCTCATCGCCTCTCTGAGATCAGACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGAGGTTGCAGTTAATGAGTTTTTGCCTGCAGCCACTGCTCTTGAAGCCATCCAGTACTCAATGGATCTTTATGCAGAGTATATTCTGCATACCTTGAGGCGATAA 708 0.4364 MGAGAAQEFVRPKISLLFTFGVVKMSENAEESQESRPVPRLNERILSSLSRRSVAAHPWHDLEIGPGAPQIFNCVVEITKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDFKELPPHRLSEIRRFFEDYKKNENKEVAVNEFLPAATALEAIQYSMDLYAEYILHTLRR* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01716 235 Gene3D Inorganic pyrophosphatase 53 231 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Rops4g01716 235 CDD pyrophosphatase 70 223 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Rops4g01716 235 Hamap Inorganic pyrophosphatase [ppa]. 70 226 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Rops4g01716 235 SUPERFAMILY Inorganic pyrophosphatase 51 231 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Rops4g01716 235 Pfam Inorganic pyrophosphatase 74 225 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Rops4g01716 235 ProSitePatterns Inorganic pyrophosphatase signature. 121 127 - -
Rops4g01716 235 PANTHER INORGANIC PYROPHOSPHATASE 25 235 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Rops4g01716 235 FunFam Soluble inorganic pyrophosphatase 4 53 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01716 Rops-Chr4 41200601 41206724 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01716 K01507 - gmx:100500365 409.453