Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01700 ATGGCAGAAGTGCAGGTACAACCTCAAGAAGACCCAACCCCACAACATCATCCTCAACATTTCCCAGGAAAAGTGCCCCATCGTCAAGGGTACATGCCCTACATGGACAAAGGTATTGCTTCTCGCTACAGACCCAATGCTCCTAAACGTGAACACTGCATATGCATCACTATCTTCATCCTCTTGATTGGCATCATAATCCTCATCCTCTGGCTTGCTTACCATCCCTCTAAACCAAATTTCACGGTGACCAGTGCTGCCATCTATGGCCTCAACAATACCACCCCACCACTCATGTCCATCACCATGCAATTCACCATCCTCATCAAGAACCCAAACAGGCGTGTCTCTATTTACTTTGACAGGCTTTCTACCTTTGTGTCCTACAGAAACCAACCCATTACCCCACATGTTATGCTGCCACCACTCTACCTAGAGAAGCACACCACCGTGTCATTGTCGCCGGAGATCGGAGGAACGCCGGTGCCGGTGTCCGAGGATGTTTCAAATGGATTGGTAATGGATCAGACATATGGGGTGGTGGGCATGAAACTGGCCTTTCTTGGAAGGTTGAGGTGGAAAACTGGTGACATAAAATCAGCACATTATGGAATGTATGTGAAGTGTGACCTATTGTTGGGTTTGAAGAAAGGTTTTGTGGGTCAGATTCCTCTACTTGGAGCTCCAGTTTGTGATGTTGATACATGA 708 0.4732 MAEVQVQPQEDPTPQHHPQHFPGKVPHRQGYMPYMDKGIASRYRPNAPKREHCICITIFILLIGIIILILWLAYHPSKPNFTVTSAAIYGLNNTTPPLMSITMQFTILIKNPNRRVSIYFDRLSTFVSYRNQPITPHVMLPPLYLEKHTTVSLSPEIGGTPVPVSEDVSNGLVMDQTYGVVGMKLAFLGRLRWKTGDIKSAHYGMYVKCDLLLGLKKGFVGQIPLLGAPVCDVDT* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01700 235 PANTHER OS05G0367900 PROTEIN 51 214 IPR044839 GO:0098542
Rops4g01700 235 Pfam Late embryogenesis abundant protein 106 208 IPR004864 -
Rops4g01700 235 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01700 Rops-Chr4 40890265 40891306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01700 22 213 EF-hand Containing Proteins AT5G21130 18.782 8.65e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01700 - - gmx:100780333 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01700 4 40890265 40891306 Rops4g01700 4 40890265 40891306 ECH