Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01695 ATGGAACTCGATCTCCGCTCATTTCTTCCGTCGCTCAACGACGGCGACGATGCCGATGACGGCCCTCACCGGACCGTCGACGAGATTCTCAACGACTGCGACACATCCACTTCATCATCACCATCATCTTCCCCTCCTTCCTCACCCTCTCACTCCACCAATTCAATTCCTCCAAAACCCACCCACTTTTCCCAACCTGGACCCGTTTCCCTTTCTCAGGTCAAACTCCAAGACCGCAACAGGACCCAGCACCCATTATCCTCCCTATTGGGCCAGGTCAGGCCCAACGCGAAGCCCGGAGCGGCGCTGGCCGCGGCCGCTGCGGCATCTAGATCGGTCCCTACGCCTCATGCGGCGGCGATCATCTCCCGGAGGAAATTCTCCACTTTCGGCAATGCCGAATCGGGTTCAGTCGCTAGCATGGGTGACGATGATGGTTCTGATGTTTCCTCGAAAAGTGAATTGGGTGAGAAATTTGATCCAGTTCCTATGAAGGTTGAAACTTCTGACAACAAAAGGGAGAACAGTGGGAGTGTTTCTTCTGTTGATGCTGGAATTGCAACTGAAGTGGATGATTTCAAAGATGGTAGTGGTGAAATTCAGGTGAATAATGATTCTTCTCTTGTGAGTGAGGAGAAAATAGATTTGGATGAGGTTAAAATTGACCATGATCTTGCGAAGGATATGAATTCTGAACCTTTTGATAATGATAATAATAGTTTTGATGAAAAAACTAGTCTTGATAATGCTGATGTTTGTGACGAGGGAATCACTGAAACAGAAGAGCTAGAGAAGGGTAGTGATAATGTGGAAGTTATTAGGAATGAGGTGAATGATGACGACATTGATGATGGTAGTTCAATAGGTGATGTTTCCGAAGTAGTGGAGGAGAGGCTTGAGGAATTGGAAAGTAGAAGAAGGGATGCTAGTAGAGAAGAGAAAAAATTAGAGTCTTCAAAGAAGCCACTTGAATTGGCTGAGGAATTGGAGAAGAGGAATGCTTCAACTGGTTTGCACTGGGAAGAGGGAGCAGCTGCTCAGCCAATGAGACTTGAGGGTGTTAAGCGGGGGTCCACTACATTGGGATATTTTGATGTTGACGCTGATAATGCTTTCACAAGGGCCATTTCAGCCCAAAACTTCAGGCGTGAGCACGGCTCTGCGCAAGTCTTGGCAGTTCATGCTAACTACGTTGCAGTAGGAATGGCCAAAGGTCTCATTGTTGTAGTGCCTAGTAAATATTCCATTCATCATGCAGACAACACTGAGGGAAAGATGTTGATGCTTGCTATACAAGGTGATCGGTCACATGCTCCTGTGACGTCCATGTCTTTCAATCAGCAAGGAGACCTACTTTTAGCTGGTTACGGAGATGGTCATGTTACACTTTGGGATGTACAAAAAGGTGTAGTGGCAAAAGTTATTAGTGGAGAGCATACATCCCCGGTAGTACATGCATTTTTTCTAGGACAGGATCCTCAGAATACTCGTCAATTTAAGGCAGTTACTGGTGATTGTAAGGGTCTGGTTCTCTTACACAGTATCTCAGTGGTCCCTTTGCTTAATAGATTCTCCATCAAAACTCAGTGTCTTCTTGATGGGCAAAGAACGGGCTTGGTGCTATCAGCCTCACCACTCCTTTCTGATGAATTTAGTGGAAGTGCTTCAACTTATTCTCAGGGAAACACCATGGTCTCAGCCAGCAGTATAAGTAGCATGATGGGAGGTGTTGTTGGGGGAGATGCAGGTTGGAAACTCTTCAATGAAGGCTCTACTTTGGTTGAAGAAGGTGTGGTTGTATTTGTCACCCATCAAACTGCTTTGGTGGTACGGCTGAGTCCTACATTGGAAGTCTATGCTCAACTATCTAGGCCAGATGGAATTCGGGAGGGTTCCATGCCATATACTGCATGGAAATGCATGCAACAAACATGTAGTTCTACTGAAAATATGCCTGCAGAAGCTGTTGAAAGAGTTTCATTGCTCGCGATTGCTTGGGAACGGAAAGTTCAGGTTGCAAAGTTGGTCAAATCAGAATTAAAAGTATATGGAAAATGGTCTCTTGACAGTGCGGCTATAGGTCTGGCATGGTTAGATGATCAGATGCTGGTAGTTCTCACTTCAACTGGACAACTGTATTTATTTGCCAAGGATGGAACTGTGATTCACCAAACTAGTTTTGCTGTAGATGGTATGGGAGGAGATGATCTAGTTTCTTATCATACTCACTTCATAAATGTATTTGGAAACCCTGAGAAAGCTTATCATAACTCTGTTGCAATAAGAGGAGCTTCTATTTATATCCTTGGTCCAACACATCTTCTTGTTTCTCGTCTTCTCCCTTGGAAAGAGCGTATTTTGGTTTTGCGGAAAGCAGGTGACTGGATGGGTGCCTTGAACATGTCAATGACTCTTTATGATGGCCATGCTCATGGGGTTGTTGACCTTCCTAGAACCTTGGATGCCATACATGAGGCCATAATGCCCTTCTTGGTGGAGTTGCTTACATCATATGTTGAAGAAGTGTTCTCTTATATTTCTGTGGCATTCTGCAACCAAATTGGAAAACTGGATCAATCCAATGATTCAAATAATAGAAGCAATTCAGTGCATTCTGAGATAAAGGAGCAATACACCCGTGTTGGTGGAGTTGCAGTTGAATTTTGTTGTCATATTAAACGGACAGACATCCTTTTTGATGAAATTTTCTCCAAGTTCATGGATGTTCAACAGAGAGAAACTTTTTTGGAGCTTCTAGAGCCATATATTTTGAAGGACATGCTTGGATCTCTACCTCCCGAGATTATGCAAGAACTGGTAGAGTATTATAGCACCAAGGGGTGGTTACAGCGGGTTGAGCAATGTGTGCTTCACATGGATATTTCATCCTTGGATTTCAATCAGGTTGTCAGATTATGCCGGGAGCATGGACTGTATAGTGCCCTGATGTATCTCTTTAATAAAGGATTAGATGATTTTAGGGCTCCTCTGGAGGAGCTGTTTGCAGTCTTACAAAATAGCCAAAAGGAAAGTGCTATTGCACTTGGGTATAGAATGCTGGTTTATCTGAAGTACTGCTTTACAGGTCTTGCCTTTCCACCAGGCCATGGGACTATTCCTCCTGCACGCTTGCCATCTCTTAGAAAAGAACTTGTAGAGTTTTTGTTAGAGGACTCTGGTACTCTGAAATCACAGACAGTTTCCAACTTTATGTCCAGACGACCATGCAAGAATCTATATCTTCTCTTAGAGTTAGACACCGAAGCTACATTAGATGTCCTCAGATGTGCTTTTGTGGAAGATGAAATTTCAGATCCCCACTCATCTCCACTGGATTCAGCTGTTAAACCTATTGAGGAAGCCCAAAAAGAAAACGATAATGTTACTGAAACTCAAAATATTTTGGTTCAGAATACAGTAGATGCTCTCATTAAAATAATTGATATGAATGTTCTTCCTACCGATACAACCTCTGGTAGTGGTGAGGATGGGTTGATAAAAGAGTGGCCTTCGAAGGACATAGGTTATCTGTTTGAGTTCATTGCATATTATGTAGCTCTCCAAAGAGCTAAAGTTTCGAAGGGTGTGCTGTCGCAAATATTGGAATATTTGACATTGGATAGTCACTTGTCTACTAATGTTTCTTTTCATAGCTCTACTCCAAAAAATAGAGAGAAACAAGTGCTTGCACTTCTGCAAGTACTGCCTGAGTCAGACTGGGATTCGTCATTTGTGCTAGACCTATGCAAGAGAGCCAAATATCATCAGGTTTGTGGATTGATTCATTCTATCAGACATGAGTATGTGGCTGCATTGGATAGTTATATGAAAGATGCAAACGAGCCTGTTCATGCCTTCTCTTTTATAAACAAAGCATTCTCACAGTTGACTGACAATGACCGTGCTGCTATTCGATCAGCAGTTATATCTCGAATTCCTGAGTTGGTTGAACTAAGCAGGGAGGGTGCATTCCATATGGTTATCAGTCATTTTAGTGATGAAAGTTCCCATATCATCACTGAACTTCACTCTCATCCAAGAAGTCTTTTCCTTTATTTAAAGACCCTCGTTGAGCTTCACTTATTTGGCACCCTAGACTTATCTGATTTAAGAAGAGATGATATTATAAATCCCCCTAATGGAAAGCAGGTTAAGGATCTCCCACAAGGAGTCAATGATTACTTAGAGAATATATCTAATTTCCCCAAGTACATGCGTGAAAATCCTATTCATGTACCTGATGATCTTATTGAGCTTTACCTGGAGTTATTATGCCAGTATGAAGGTAGTTCAGTTCTCAAGTTTCTGGAAATGTTTGATAGCTACCGTGTGGAACATTGTTTACGCCTGTGCCAAGAATATGGCATTATAGATGCTGCTGCTTTCTTATTAGAAAGGGTTGGTGATGTTGGTAGTGCTCTTTTACTTACACTTTCTGATCTGAATGATAAATTTGTTTTGCTTGATGCTGCTGTGGAAGCTGTAGTTTTAAACCATCGCAAGAGTCGTTCTTCCCATGCAGAAGTATTCAATGCTGTTTTAAGAGCAAAGGAGGTGAATGACATGCACAATTTATTGCGTGCCTGTATTGGTCTATGTCAGCGGAACACCCCTCGTCTAAATCCCGAGGAATCAGAGGCACATTGGTTTAAATTACTTGACTTGTTTTGTGACCCATTGATGGATTCGTATGTTGAAGAGAGAGCATATGAAAGAAAGAATTATTTTGGAATGCTAGCTGGATCAGAGGATTCACAACTGGACAAAGACACCTGTAAAAGCAGTTGGAAAATTTCAAAGTCCCGGAATGGTCATATCTTGAGAAAATTGCTGGCCCAGTTCATTAAAGAGATTGTCGAGGGAATGATAGGTTTTGTTCACCTTCCAACTATCATGTCCAAACTCCTGTCTGATAATGGTAGTCAAGAATTTGGCTATTTTAAACTTACCATATTGGGTATGCTGGGAACATATGGCTTTGAAAGAAGAATTCTGGATGCTGCCAAATCATTGATCGAAGATGATACGTTTTATACTATGAGTATACTCAAGAAAGGGGCCTCTCATGGATTCGCTCCCAGGAGCTTAATGTGCTGCATATGTAATTGCCTCCTTACAAAGAACTCTGTCAGCTCTGGTATTCGAATTTTCAACTGTGGCCATGCAATTCATCTCCAATGTGAAGTTTCGGAAAACGAGTCATCAAGCAGAGGATATTCCTCTGGATGCCCTGTATGTATGCCCAACCAGAAACCCCTGCAGTCTAGAAACAAATCAGTCATTGCAGTGAATGGCTTGGTCAATAAATTCTCATCGAGACGACAATACCCTCATGGAAGTACCGTCCATCCACATGACAATGATCTATCAGAGAATATGTATGGACTGCAACAGATATCACGGTTTGAGATCTTGAACAGCTTGCAGAAAAATCAGAGATTTATGCAAATAGAAAACTTGCCTCCATTGAGGCTTTCCCCACCTGCTGTATACCATGAAAAGGTAAGCAAAGTGACAGACTTTATGACTGGTGAAAGTAGCAATAGTTCTGCAGTTATAGAGAAACAAAGTAGAAACAAGCAAAACCGGGAGCTTAGAGTTAAAGGTTCATCAATTCGATTTCCTCTAAAATCAAGTATATTTGGCAAGGAAAAGACAAATAAGCGGTGA 5670 0.4222 MELDLRSFLPSLNDGDDADDGPHRTVDEILNDCDTSTSSSPSSSPPSSPSHSTNSIPPKPTHFSQPGPVSLSQVKLQDRNRTQHPLSSLLGQVRPNAKPGAALAAAAAASRSVPTPHAAAIISRRKFSTFGNAESGSVASMGDDDGSDVSSKSELGEKFDPVPMKVETSDNKRENSGSVSSVDAGIATEVDDFKDGSGEIQVNNDSSLVSEEKIDLDEVKIDHDLAKDMNSEPFDNDNNSFDEKTSLDNADVCDEGITETEELEKGSDNVEVIRNEVNDDDIDDGSSIGDVSEVVEERLEELESRRRDASREEKKLESSKKPLELAEELEKRNASTGLHWEEGAAAQPMRLEGVKRGSTTLGYFDVDADNAFTRAISAQNFRREHGSAQVLAVHANYVAVGMAKGLIVVVPSKYSIHHADNTEGKMLMLAIQGDRSHAPVTSMSFNQQGDLLLAGYGDGHVTLWDVQKGVVAKVISGEHTSPVVHAFFLGQDPQNTRQFKAVTGDCKGLVLLHSISVVPLLNRFSIKTQCLLDGQRTGLVLSASPLLSDEFSGSASTYSQGNTMVSASSISSMMGGVVGGDAGWKLFNEGSTLVEEGVVVFVTHQTALVVRLSPTLEVYAQLSRPDGIREGSMPYTAWKCMQQTCSSTENMPAEAVERVSLLAIAWERKVQVAKLVKSELKVYGKWSLDSAAIGLAWLDDQMLVVLTSTGQLYLFAKDGTVIHQTSFAVDGMGGDDLVSYHTHFINVFGNPEKAYHNSVAIRGASIYILGPTHLLVSRLLPWKERILVLRKAGDWMGALNMSMTLYDGHAHGVVDLPRTLDAIHEAIMPFLVELLTSYVEEVFSYISVAFCNQIGKLDQSNDSNNRSNSVHSEIKEQYTRVGGVAVEFCCHIKRTDILFDEIFSKFMDVQQRETFLELLEPYILKDMLGSLPPEIMQELVEYYSTKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYSALMYLFNKGLDDFRAPLEELFAVLQNSQKESAIALGYRMLVYLKYCFTGLAFPPGHGTIPPARLPSLRKELVEFLLEDSGTLKSQTVSNFMSRRPCKNLYLLLELDTEATLDVLRCAFVEDEISDPHSSPLDSAVKPIEEAQKENDNVTETQNILVQNTVDALIKIIDMNVLPTDTTSGSGEDGLIKEWPSKDIGYLFEFIAYYVALQRAKVSKGVLSQILEYLTLDSHLSTNVSFHSSTPKNREKQVLALLQVLPESDWDSSFVLDLCKRAKYHQVCGLIHSIRHEYVAALDSYMKDANEPVHAFSFINKAFSQLTDNDRAAIRSAVISRIPELVELSREGAFHMVISHFSDESSHIITELHSHPRSLFLYLKTLVELHLFGTLDLSDLRRDDIINPPNGKQVKDLPQGVNDYLENISNFPKYMRENPIHVPDDLIELYLELLCQYEGSSVLKFLEMFDSYRVEHCLRLCQEYGIIDAAAFLLERVGDVGSALLLTLSDLNDKFVLLDAAVEAVVLNHRKSRSSHAEVFNAVLRAKEVNDMHNLLRACIGLCQRNTPRLNPEESEAHWFKLLDLFCDPLMDSYVEERAYERKNYFGMLAGSEDSQLDKDTCKSSWKISKSRNGHILRKLLAQFIKEIVEGMIGFVHLPTIMSKLLSDNGSQEFGYFKLTILGMLGTYGFERRILDAAKSLIEDDTFYTMSILKKGASHGFAPRSLMCCICNCLLTKNSVSSGIRIFNCGHAIHLQCEVSENESSSRGYSSGCPVCMPNQKPLQSRNKSVIAVNGLVNKFSSRRQYPHGSTVHPHDNDLSENMYGLQQISRFEILNSLQKNQRFMQIENLPPLRLSPPAVYHEKVSKVTDFMTGESSNSSAVIEKQSRNKQNRELRVKGSSIRFPLKSSIFGKEKTNKR* 1890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01695 1889 SMART ring_2 1698 1746 IPR001841 -
Rops4g01695 1889 MobiDBLite consensus disorder prediction 303 322 - -
Rops4g01695 1889 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1355 1522 IPR000547 GO:0006886|GO:0016192
Rops4g01695 1889 Gene3D - 358 524 IPR015943 GO:0005515
Rops4g01695 1889 MobiDBLite consensus disorder prediction 1 116 - -
Rops4g01695 1889 MobiDBLite consensus disorder prediction 132 206 - -
Rops4g01695 1889 PANTHER VACUOLAR PROTEIN SORTING VPS41 226 1819 IPR045111 GO:0006623
Rops4g01695 1889 SMART WD40_4 424 465 IPR001680 GO:0005515
Rops4g01695 1889 MobiDBLite consensus disorder prediction 147 172 - -
Rops4g01695 1889 MobiDBLite consensus disorder prediction 31 90 - -
Rops4g01695 1889 MobiDBLite consensus disorder prediction 1845 1869 - -
Rops4g01695 1889 Coils Coil 1118 1138 - -
Rops4g01695 1889 Pfam Region in Clathrin and VPS 1417 1483 IPR000547 GO:0006886|GO:0016192
Rops4g01695 1889 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 433 469 - -
Rops4g01695 1889 SUPERFAMILY WD40 repeat-like 391 724 IPR036322 GO:0005515
Rops4g01695 1889 ProSitePatterns Trp-Asp (WD) repeats signature. 452 466 IPR019775 -
Rops4g01695 1889 CDD RING-H2 1698 1747 - -
Rops4g01695 1889 ProSiteProfiles Trp-Asp (WD) repeats profile. 440 474 IPR001680 GO:0005515
Rops4g01695 1889 Pfam Golgi CORVET complex core vacuolar protein 8 914 1098 IPR025941 -
Rops4g01695 1889 MobiDBLite consensus disorder prediction 16 30 - -
Rops4g01695 1889 ProSiteProfiles Zinc finger RING-type profile. 1698 1746 IPR001841 -
Rops4g01695 1889 Coils Coil 292 319 - -
Rops4g01695 1889 MobiDBLite consensus disorder prediction 227 246 - -
Rops4g01695 1889 SUPERFAMILY RING/U-box 1691 1748 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01695 K20178 - gmx:100780869 2879.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01695 4 40855495 40867584 Rops4g01695 4 40855495 40867584 ECH