Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01694 ATGGGACTTCGATCTCTAAAGCAGACCAATACTCACAATGGACTGAGAATTTTGAACCCTGTGGATGAGCTACTAAATAGAACCCCAATTCAAATGAAGGCAGTGCAGGCTAAGAGGAAGGGTCTAAAAGGCAAGAATTTCAGGCCAACAGGTATCATCATTTGTGGCATGAATTTGATCTTTGTAGGAACGGAGGTTGCTCCATGGAGCAAAACTGGTGGGTTAGGAGATGTTTTAGGAGGTCTTCCACCAGCATTAGCAGCTAATGGGCACCGAGTTATGACCGTTGCTCCTCGTTATGATCAGTATAAAGATGCATGGGATACAAGTGTAGTGATTGAGGTGAAAGTAGGAGATAGAACAGAAAAAGTTTGCCTTTTCCATTGCTATAAAAGAGGGGTTGATCGTGTCTTTATAGATCACCCTATGTTTCTTGAAAAGATCTGGGGGAAAACTGGAACCAAACTTTATGGACCTGCTGCAGGAGAGGATTACCAAGACAACCAACTGCGTTTTAGCCTGTTCTGCCAGGCAGCTTTAGAAGCACCAAGGGTTCTGAATCTTAATAGCAATAAATATTTCTCTGGTCCATATGGTGAAGATGTCATTTTCATCGCCAATGATTGGCACACTGCCCTTCTCCCTTGCTACTTGAAAACTATGTACCAGTCAATTGGCATCTTTAAGAATGCCCGAGTTATATTTTGTATCCACAACATTGCTTACCAAGGCAGATTTGCATTCGCAGACTTTCCACTTCTCAACCTTCCTGACCAATTTAGAAGCTCCTTTGACTTCATTGATGGGCATGTTAAACCAGTGGTTGGAAGGAAAATCAATTGGCTGAAAGCTGGAATTTTAGAATCACACCTGGTATTAACTGTTAGTCCATACTATGCTCAAGAGCTAGTGTCAGGCCCTGATAAAGGAGTGGAGTTGGACAACATCCTTAGACGAACTGGTATTACTGGAATTGTAAACGGCATGGATGTTCAGGAGTGGAATCCATCCACTGACAAATATATAACTGTCAAATACAATGCTTCAACAGTATTGGAAGGAAAGGCTCTTCTGAAAGAAGCCCTCCAAGCAGAAGTTGGATTGCCAGTTGACAGAAATATTCCTCTAATTGGTTTCATTGGTAGGCTTGAAGAGCAAAAAGGTTCTGATATTCTTGTAGCAGCCATTCCCCAGTTTATTAGGGAGAATGTCCAGATAGTAGCTCTAGGAACAGGGAAGAAACAAATGGAAAAGCAGCTTCAGCAACTTGAACTATCATACCCTGACAAGGCCAGAGGAGTTGCAAAATTCAATGTTCCCTTAGCCCACATGATATTTGCTGGAGCTGATTTTATATTGGTTCCTAGCAGATTTGAGCCTTGTGGTCTCATTCAGTTACAAGCTATGCGCTATGGAGCTGTACCTATTGTTGCATCAACAGGTGGATTAGTTGACACAGTCAAAGAAGGTTTCACTGGATTTCACATGGGTGCCTTCAATGTTGAATGTGATGCTGTGGATCCTGAGGATGTGGATGCTCTAGCAAAGACCGTCAAAAGGGCCCTTGCAGTCTATGGAACTCTAGCTTTTACAGAAATGATCAAGAATTGCATGGCTCAAGATCTTTCATGGAAGGGACCTGCCAAGAAGTGGGAGGAAGTACTGCTAAACTTGGGAGTTCCTGGCAGTAAACCTGGAATTGATGGAGAAGAAATTGCTCCACAGGCAAAGGAAAACGTGGCAACTCCATGA 1752 0.4281 MGLRSLKQTNTHNGLRILNPVDELLNRTPIQMKAVQAKRKGLKGKNFRPTGIIICGMNLIFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTVAPRYDQYKDAWDTSVVIEVKVGDRTEKVCLFHCYKRGVDRVFIDHPMFLEKIWGKTGTKLYGPAAGEDYQDNQLRFSLFCQAALEAPRVLNLNSNKYFSGPYGEDVIFIANDWHTALLPCYLKTMYQSIGIFKNARVIFCIHNIAYQGRFAFADFPLLNLPDQFRSSFDFIDGHVKPVVGRKINWLKAGILESHLVLTVSPYYAQELVSGPDKGVELDNILRRTGITGIVNGMDVQEWNPSTDKYITVKYNASTVLEGKALLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVAAIPQFIRENVQIVALGTGKKQMEKQLQQLELSYPDKARGVAKFNVPLAHMIFAGADFILVPSRFEPCGLIQLQAMRYGAVPIVASTGGLVDTVKEGFTGFHMGAFNVECDAVDPEDVDALAKTVKRALAVYGTLAFTEMIKNCMAQDLSWKGPAKKWEEVLLNLGVPGSKPGIDGEEIAPQAKENVATP* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01694 583 Hamap Glycogen synthase [glgA]. 57 558 IPR011835 GO:0004373
Rops4g01694 583 Gene3D Glycogen Phosphorylase B; 59 549 - -
Rops4g01694 583 FunFam Starch synthase, chloroplastic/amyloplastic 58 334 - -
Rops4g01694 583 CDD GT5_Glycogen_synthase_DULL1-like 58 554 - -
Rops4g01694 583 Gene3D Glycogen Phosphorylase B; 330 540 - -
Rops4g01694 583 FunFam Starch synthase, chloroplastic/amyloplastic 335 540 - -
Rops4g01694 583 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 56 561 - -
Rops4g01694 583 Pfam Starch synthase catalytic domain 59 318 IPR013534 -
Rops4g01694 583 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 53 555 - -
Rops4g01694 583 Pfam Glycosyl transferases group 1 375 500 IPR001296 GO:0016757
Rops4g01694 583 NCBIfam glycogen/starch synthase, ADP-glucose type 57 556 IPR011835 GO:0004373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01694 Rops-Chr4 40848814 40852628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01694 8 583 Glycosyltransferase AT1G32900 71.280 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01694 K13679 - gmx:100037476 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01694 4 40848814 40852628 Rops4g01694 4 40848814 40852628 ECH