Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01680 ATGCAGCAGACACCGTCAATGATTCCTATGATGCCTTCATTCCCACCTACAAACATAACCACCGAGCAGATTCAAAAATATCTTGATGAGAACAAGAAGCTGATTCTGGCAATATTGGACAATCAAAATCTTGGAAAACTTGCTGAATGTGCCCAGTACCAAGCTCAGCTTCAGAAAAATTTGATGTATTTAGCTGCAATTGCTGATGCCCAGCCACAAACACCAGCCATGCCTCCACAGATGACTCCACACCCAGCAATGCAACCAGGATTCTATATGCAACATCCTCAGGCTGCAGCGATGGCTCAGCAACCAGGACTTTTCCCCCAAAAAATGCCATTGCAATTTGGTAATCCACATCAAATGCAGGATCAGCAACAGCAGCTACACCAACAGGCCATCCAAGGGCAAATGGGGCTGAGACCTGGAGGGTTAAATAATGGCATGCATCCGATGCACAGTGAGGCTGCTCTTGGAGGTGGCAGTGGTGGTGGTCCACCTTCGGCTGCCGGTCTGAACGATGGACGTGGTGGAAGCAAGCAAGATGCTTCTGAGGCTGGGACAGCTGCTGGAGATGGCCAGGGCAGCTCTGCCGCCGCACATAACAGTGGAGATGGTGAATCTTCTTATCTTAAGGGGTCAGAAGAGGCAAAGTGA 657 0.4947 MQQTPSMIPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPAMPPQMTPHPAMQPGFYMQHPQAAAMAQQPGLFPQKMPLQFGNPHQMQDQQQQLHQQAIQGQMGLRPGGLNNGMHPMHSEAALGGGSGGGPPSAAGLNDGRGGSKQDASEAGTAAGDGQGSSAAAHNSGDGESSYLKGSEEAK* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01680 218 MobiDBLite consensus disorder prediction 116 135 - -
Rops4g01680 218 Coils Coil 217 218 - -
Rops4g01680 218 MobiDBLite consensus disorder prediction 109 218 - -
Rops4g01680 218 MobiDBLite consensus disorder prediction 195 209 - -
Rops4g01680 218 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 2 215 IPR044779 GO:0003713
Rops4g01680 218 Pfam SSXT protein (N-terminal region) 18 74 IPR007726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01680 Rops-Chr4 40589302 40592441 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01680 - - vun:114167142 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01680 4 40589302 40592441 Rops4g01680 4 40589302 40592441 ECH