Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01653 ATGGCGAGTGTGGCATGGAAGCAGCTTCTTCTCAATGCTTTGGAATCCAATGGTCACCTCAAACACTCTTCTTTCATGCAACTCGCAACTGTAGGAAGCAACGGAACACCTTCGAATCGCAGTGTCGTTTTTAGAGGATTCCAAGACAACACTGATAACATCCAAATCAACACTGATACCCGCACCCGCAAGATTGAAGAGCTCAAGCTTTGTTCTTCTGCTGAGATATGTTGGTATTTCACAGATTCCTGGGAGCAATTCAGGATAAATGGGAATGTAGATATCATTGATGGGTTGAATCCTGATCCTCTAAAACTTCAGCAAAGAGAAAAATCTTGGTTTTCCAGTTCACTGAGATCAAGGTCACAATATTTGGGGACCTACCCGGGTCTGCCTTGTCTACATGAGCAAGCACAGCAAGAAATATCATTGGATCCTTCTACAGGTCCAGTTGATGCGTTTTGTCTACTGGTCCTAGAACCAGATCGGGTTGATTACTTGAATCTGAAGAGTAACCAGAGGCTAACATTCAAATCCAGTGTGGGAGCTGAAGCAAAGAAAAGTTGGACTATGGAGAGGGTCAACCCATGA 591 0.4399 MASVAWKQLLLNALESNGHLKHSSFMQLATVGSNGTPSNRSVVFRGFQDNTDNIQINTDTRTRKIEELKLCSSAEICWYFTDSWEQFRINGNVDIIDGLNPDPLKLQQREKSWFSSSLRSRSQYLGTYPGLPCLHEQAQQEISLDPSTGPVDAFCLLVLEPDRVDYLNLKSNQRLTFKSSVGAEAKKSWTMERVNP* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01653 196 Pfam Pyridoxamine 5'-phosphate oxidase 5 96 IPR024624 GO:0010181
Rops4g01653 196 Gene3D - 2 196 IPR012349 -
Rops4g01653 196 SUPERFAMILY FMN-binding split barrel 5 196 - -
Rops4g01653 196 NCBIfam PPOX class probable FMN-dependent enzyme, alr4036 family 5 196 IPR024015 -
Rops4g01653 196 PANTHER PYRIDOXINE-5-PHOSPHATE OXIDASE 5 196 IPR000659 GO:0004733|GO:0008615|GO:0010181
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01653 Rops-Chr4 39990008 40008569 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01653 K00275 - gmx:100779815 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01653 4 39990008 40008569 Rops4g01653 4 39990008 40008569 ECH