Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01650 ATGGCCAACTTAGTCACCTTGCTAATGTTGTGGATGAGCATGATATGTACTATCTACAATGTGAAACTTATGGCATATGGAGAATCAACCAGGTTCTATGATTTCAAGGTTCAAACTAAAAGAGTTACCAAACTTTGCAACTCCAAAGACATTGTCACAATTAATGGTATGTATCCAGGACCTGTTGTTTATGCCCAAGAAGATGATAGAATCATAGTCAAAGTTACCAATAAGACACCTTTCAATATTACAATTCACTGGCATGGTGTTCGGCAAAAGCTATCATGCTGGTACGATGGGCCATCTTTTATTACACAATGTCCAATTCAAGCAGGCCAGAGTTTCACCTATAATTTTTCAATGGTGAATCAGAAGGGCACCTTCTTCTGGCATGCTCATGTTTCTTGGCTAAGAGGAACGGTTTATGGTGCTATGATTGTTTATCCAAAGACCGGGATACCTTACCCATTTAAGATTCCTTATCAAGAGCATATAATCATACTAGGGGAGTATTGGCTGCAAGATCTCCAACAAATTGAGCATGCCACTCTAGCTAGTGGTGGAGGACCTCCTACAGCAGATGCATATAGTATCAACGGTCATCCAGGCCCCAACTACAACTGCTCCATTAATGATGTCTACCAAATTGATGTGATTCCGGGGAAGACCTATTTGTTAAGACTGATTAATGCGGGTTTAAATACTGAGAACTTCTTTGCCATTGCTAATCACAAATTAACAATTGTGGAAGCTGATGCTGAATACACTAAGCCATTCACGACAGACACTGTGATGATTGGACCAGGCCAAACACTGAATGTCCTTGTCTCTGCTGATCAACCAGTAGGAAAATACTCCATAGCTGTGGCACCTTACAAGTCAGGCAGGGTTGTCAATTATCAAAACATTTCAGCCATTGCCTGCTTCAACTATAAAGGCACAGCATCTGATAGCGTATACTTACCAGCTAAATTACCTAAACTTGATGATAAACTAGCTGTTAAGTCAGTCATGGATGGATTAAGGAGCCTAAATCAAGTCAATGTTTTCAAAGAAATCGATAAAAACCTATTCATCACCATTGGATTGAATGTTCAAAAGTGTCATTCAAAGACACCAAAGCAAAACTGCCAAGGCATGAATAATGGGGTGCTGACAGCTTCAATGAACAATATAAGTTTCATTCGTCCCAATATTTCAATCCTGGAAGCATATTATAAGAAGATAAAAGGATTATATACTGAAGATTTTCCTGACACACCCCCTAAGTTCTATGACTTTGTTAATGGTGCCCCTAATAACGTTCCATATGATACACAGTCATTAAATGGGACTAGAGCAAAGGTCCTTGAATATGGTAGCAAGGTGCAACTCATTCTGCAGAACACAGGGACAGTCAACATTGAAAACCACCCTATTCACTTCCATGGCTACAGCTTTTATGTTGTAGGGTATGGCACAGGCAACTATGACCCACTAACTGCACAATTCAACTTAGTAGATCCACCATATATGAATACAATTGGAGTTCCAGTGGGTGGATGGGCAGCAATTCGCTTTGTTGCTGATAATCCAGGGGTGTGGTATCTGCACTGTCACATTGATATACACCAAGCATGGGGACTAGGAATGGTATTTATAGTGAAAAATGGAAAAGGAAAGCTCGAGTCCTTACCACCTCCTCCACCAGACCTGCCACAATGTTAA 1707 0.4036 MANLVTLLMLWMSMICTIYNVKLMAYGESTRFYDFKVQTKRVTKLCNSKDIVTINGMYPGPVVYAQEDDRIIVKVTNKTPFNITIHWHGVRQKLSCWYDGPSFITQCPIQAGQSFTYNFSMVNQKGTFFWHAHVSWLRGTVYGAMIVYPKTGIPYPFKIPYQEHIIILGEYWLQDLQQIEHATLASGGGPPTADAYSINGHPGPNYNCSINDVYQIDVIPGKTYLLRLINAGLNTENFFAIANHKLTIVEADAEYTKPFTTDTVMIGPGQTLNVLVSADQPVGKYSIAVAPYKSGRVVNYQNISAIACFNYKGTASDSVYLPAKLPKLDDKLAVKSVMDGLRSLNQVNVFKEIDKNLFITIGLNVQKCHSKTPKQNCQGMNNGVLTASMNNISFIRPNISILEAYYKKIKGLYTEDFPDTPPKFYDFVNGAPNNVPYDTQSLNGTRAKVLEYGSKVQLILQNTGTVNIENHPIHFHGYSFYVVGYGTGNYDPLTAQFNLVDPPYMNTIGVPVGGWAAIRFVADNPGVWYLHCHIDIHQAWGLGMVFIVKNGKGKLESLPPPPPDLPQC* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01650 568 Pfam Multicopper oxidase 163 313 IPR001117 -
Rops4g01650 568 SUPERFAMILY Cupredoxins 24 172 IPR008972 -
Rops4g01650 568 SUPERFAMILY Cupredoxins 161 320 IPR008972 -
Rops4g01650 568 Gene3D - 11 149 IPR008972 -
Rops4g01650 568 SUPERFAMILY Cupredoxins 351 568 IPR008972 -
Rops4g01650 568 Gene3D - 161 346 IPR008972 -
Rops4g01650 568 NCBIfam laccase 30 568 IPR017761 GO:0046274|GO:0048046|GO:0052716
Rops4g01650 568 Gene3D - 366 568 IPR008972 -
Rops4g01650 568 ProSitePatterns Multicopper oxidases signature 1. 526 546 IPR033138 -
Rops4g01650 568 CDD CuRO_2_LCC_plant 164 311 IPR034285 -
Rops4g01650 568 Pfam Multicopper oxidase 37 150 IPR011707 GO:0005507
Rops4g01650 568 CDD CuRO_3_LCC_plant 413 551 IPR034289 GO:0005507
Rops4g01650 568 CDD CuRO_1_LCC_plant 33 149 IPR034288 GO:0005507
Rops4g01650 568 ProSitePatterns Multicopper oxidases signature 2. 531 542 IPR002355 GO:0005507
Rops4g01650 568 PANTHER MULTI-COPPER OXIDASE 37 553 IPR045087 -
Rops4g01650 568 Pfam Multicopper oxidase 418 551 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01650 Rops-Chr4 39986840 39989476 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01650 K05909 - gmx:100789406 1013.06