Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01631 ATGGAAGATGAAGCAGCGCTTGAAGACGCGTTAGACTCAGTCGTCAAGCCCACTTCCTCGTCTGGGTCGACGGACTCCGACGGTAGAGAAGCAGGCATAAACCCTTCCTCCGGCGTCCAGAAATATGAGTGCCAGTACTGTTGCCGAGAGTTCACAAACTCTTGTATAAAGGGACCTGCTTTTTGTTCTTTGGAGTTGAAAATGGCACCAAGAAACAGTCGTGGAAAGGCCAAGGGAGAGAAGAAGAAGAAGGAAGAGAAGGTTCTTCCTGTCGTTATGGATATCACTGTGAACCTTCTTGATGAAACTCATGTTGTTCTCAAGGGAATATCAACGGACAGAATAATAGATGTTCGTAGACTTTTATCGGTGAATATGGAGACATGTTATATCACAAATTTTTCACTATCCCATGAGGTAAGAGGGCCACGGTTGAAGGATACAGTGGATGTGTCCGCACTGAAGCCCTGTGTCCTCACTCTAGTTGAAGAGGATTACGATGAAGAACGAGCAGTGTCGCACGTGCGAAGACTCCTCGACATCGTTGCCTGCACCACCAGCTTCGGTCCGTCGTCTCCGCCGAAGAATGCCGCAGCCGCCACCTCGCCGAAGTCTACGGAATCTCAAACGCCGGCGGCGGCTGACGGAGACGGCGAGATAAGCCACTCATGCCCTAAGCTCGAGAGTTTCTACGAATTTTTCTCCCTCTCTCACCTCACTGCTCCTCTTCAATATGTGAAGAAAGCTTCGAGGAGGCACGTGGAGGAGATATCGGATGCGGATTATCTCTTCTCGCTCGATGTGAAGCTGTGTAACGGGAAAGTGGTGCACGTTGAGGCTTGTAGAAAGGGGTTTTATAGCGTTGGGAAGCAGCGGATTCTGTGTCATAATCTTGTTGATTTGTTGAGACAACTTAGCAGAGCTTTTGACAATGCTTTTGATGATCTCTTGAAGGCATTTTCAGAACGTAATAAGTTTGGGAATCTACCCTATGGCTTCAGAGCCAATACATGGCTTATTCCTCCTATTGCAGCACAATCACCTTCATGTTTTCCTCCTCCTCCTTTGGAGGATGAAACTTGGGGAGGAAATGGTGGTGGTCTTGGAAGAGACGGAAAGTTTGATTTGATTCCTTGGGCCAATAAGTTTTCATTTATTGCATCTATGCCTTGCAAGACAGCAGAAGAAAGGCAAGTTCGTGATAGAAAAGCATTTCTTCTGCACAGCCTGTTTGTTGATGTTGCCATTTTCAGAGCAATCAGGGCTGTTAAACATGTTATGGAAGAACCCAATAGCTGCTCAGTTGCAGAAAATGATATTATTTACACCGAGAGAGTAGGTGACTTGAGTATCAGAGTCTTCAAAGATGCTTCTGTTGCGAGCTGTAAGATTGATACCAAAATTGATGGAGTGGAAGCTACTGGAGTAAATCAAAAGGATCTTGTTGAACGAAATCTACTGAAAGGAATCACTGCTGATGAAAATACAGCTGCCCATGACATTACCACTTTAGGTGTTGTCAATGTAAGATATTGTGGTTATGTGGTTGTTGTGAAAGTTGAAGGTGGAGTCAATGAAAATGTCAATTCTCCATCTGATCAAGATATTGAATTGTTTGATCAGCCAGAGGGTGGTGCCAACGCACTAAATATTAACAGTTTGAGATTACTTCTTCACAGCACAACCCAACCAGAGAACAATAAACAGATGACTCAGATACATATGTTTGAGAATGAAGAGCTTGGTGGTTCCCATGCTTTTGTAGAGAAGCTGATTAAAGAAAGCGTTGCTAAGCTTGAGGAAGAGGAACCAGGTTTGAACTATTTCGTAAGATGGGAACTTGGAGCTTGCTGGATACAACATTTGCAAGACCAAAACAGTACAGAAAAAGATAAGAAGACATCTTTGGAGAAGGCTAAGAATGAAATGAAGGTGGAGGGTCTTGGGAAACCCCTCAAGCCCCTCAAGAATAATAAAAAGAAAACTGATTCAAACAATACTAATTTTGCATCCGAGTATTCAAAATCTAAACAGGAGGCTGAAAATGCTCCATTGCCCTCAATTGAATCCCACCATGAAACTACGGCAGCTGATAATGAGCTTGTGCTGAAAGCGATGTTATCTGAAGCAGCTTTTACCCGATTAAAAGAATCAGGAACTGGGCTTCACTGCAAGTCTATGCAAGATTTGATTGACTCATCTCGGAAATATTACATGGATGTTGCTATCCCGAAACTGGTAGCAGATTTTGGCTCATTGGAACTCTCTCCAGTTGATGGCCGCACCCTAACTGATTTTATGCATACTAGGGGTCTACGAATGCGATCTCTTGGACATGTGGTCAAGTTATCAGAAAAACTTTCACATGTGCAATCTCTATGTATTCATGAGATGATTGTTCGAGCTTTCAAGCACATCATGAGGACAGTGATTTCTTCTGTTGTTGACAAGGAGAAAATGGCTTCATCAATTGCTGTTACATTGAATTTGCTGCTTGGTGTTCCTGAAAATAGAGAATCAGATAAATCATGCGAAGTTCACCCAGTTGTGTGGACATGGCTTGAGTTGTTTTTGAAGAAACGATTTGATTGGGATCTTAACAGGTTGAATTACAAAGATGTGAGAAAATTTGCAATATTACGTGGCTTGTGTCACAAGGTGGGAATTGAACTTGTTCCAAGGGATTTTGATATGGATTCTCCTTTTCCCTTCCAAAAATCCGATATTGTCAGCTTGGCCCCAGTTCACAAGCAAGCAGCATGCTCATCTGCAGATGGAAGGCAGCTCCTAGAGTCCTCCAAAACAGCTTTGGACAAGGGAAAGCTTGAAGATGCAGTTACCTATGGAACAAAGGCTCTTGCCAAGCTGGTAGCAGTTTGTGGTCCCTACCATCGAATGACAGCGGGAGCATACAGCCTCCTTGCTGTAGTTTTATATCATACTGGAGACTTCAATCAGGCCACAATTTATCAACAAAAAGCCTTGGATATCAATGAAAGAGAGTTAGGTCTGGATCATCCTGATACCATGAAGAGCTATGGGGATCTTGCAGTTTTCTATTACAGACTTCAACACACAGAGCTGGCTCTGAAGTATGTGAAGCGTGCTTTATATCTTTTGCATCTGACATGTGGCCCATCTCATCCAAACACTGCTGCAACATACATAAATGTGGCTATGATGGAGGAAGGTCTGGGAAATGTACACATTGCTCTCAGATATCTTCACAAAGCATTAAAGTGCAACCAAAGATTACTTGGTGCAGATCATATTCAGACAGCTGCAAGTTATCATGCAATAGCAATAGCACTCTCATTGATGGAAGCATATCCATTGAGCGTGCAGCATGAGCAAACAACTTTGCAAATTCTGCGGGTCAAACTTGGCCCTGATGACTTGCGTACACAGGATGCTGCGGCTTGGCTTGAGTATTTTGAGTCCAAGGCTTTTGAACAGCAAGAAGCTGCTCGAAATGGTACTCGAAAACCAGATGCATCTATAGCTAGCAAAGGCCATCTAAGTGTGTCAGATCTTCTTGACTACATTAATCCTAATCACGATACCAAAGGGAGAGATGCAACAGCAAAGAGAAGAAGCCAGATAATAAAGGTGAGGGCAACATCCAACCAGAATATTTTCTCAGCAAGTTCTGATGATTCTTCAAAAGAAATTCAAAAAGAGGCTTCAGATGAAGAGGTACCTATACCTGAACCAGGAGGTAGTGCAGATTCTGAGCATGAGAGCAATTCTGCATCTGATTCAGAACAGCCTATTTTAGAAAAGATCTCAGATGAAAAGCTACAAGTTTCTGGTGAAACATTGTCTGAAGCACATGCTGATGGAGAGGATGGATGGCAACCAGTTCAAAGACCAAGATCGGCTGGCTCATATGGCCAGCGACTGAAGCAAAGGCGGGCAACACTTGGCAAAGTTTATAGTTATCAGAAGAATGTGGAAGTTGGCACAGAATATCCTGTCATGAAGAGTGCTAATCAGAATAGTAGGTATTATTTCTTGAAGAAGCGAACAACGTACCATGGGGGTTATACAGATAATCATAATGTAAACATCACACAAGGCACCAAATTTGGAAGGAAAGTAGTCAAAGCTGTTGCTTACAGGGTCAAGTCTATGCCCTCAGCTTCCAAGACTGCGGCAAATGAGACATTAGAAATTGATGACAAGCTAGTCAGTTCTCCTTCAGAATCTGAAACAAATGATGTTAATCCAGTTAAGACTTCTATAGTTAGTCTTGGAAAATCTCCTTCGTACAAGGAAGTAGCCTTGGCTCCTCCTGGGACTATCTCCAAGTTGCAGGTCTATAATCCTCAAAGCGAGATTCCTGAAAGCCGTGAACATGATGTTGGAGAACATGAAGAGAAAGATGTTGAAGCTCACAGAATTATTAATCCAACCCCAAAAGAGGTAAATGATATGTTTAAAGAGAAGTACGATGATTCTTTATCAGAATCTGTAGATGATTCAACAGATGATACTGTAGTTGCTACTGAGAAGAAAGAGGAAACTCAGTTGATTAACGTTGTGCAAGATAATTGTGCGAGTGCTGAGGAGCTTCAATCTGAGGATGTTGAAGCTCAAGGAGCAGTTGATAATGGCATAGTGATTGATGCAGAAGAGGATCCTGTGGATTCTTACAAACAAGAACTTAATGCAACTAATTCATCTGGCAGTTTTGAACCTAGTGATAATGCAAATTCCAATTCACAAGGTGGTGAGGATTTAAGGGTCAATATATCATCATCGAGTCAGGGTCATGTTGGGGGCATTTCGAATAAGAAGTTGTCTGCATCTGCAGCTCCGTTCAACCCATCACCTGCCATTGCACGAGCTGCACCGATTCCCATGAATATAACTCTTCCTTCTGGCCCTGGTGCTGTTCCAGCTATTGGCCCCTGGCCAGTAAACATGAATGTTCATCCTGGACCTGCTACTGTGCTACCTGCAGGTTCCCAAATGTGTTCATCTCCTCACCATGCATATCCATCACCTCCAACAACACCAAACATGATTCAACCATTGCCATTTATGTATCCTCCTTATACTCAACCTCAATCAGTACCAACCAGCAACTTTCCCGTCACTAGCAGTGCCTTTCACGCCAATCATTTTGCATGGCAATGTAATTTGAACCACACCATATCTAAGTTTGGTCCCAGTGCTGTTTGGCCTGGTTGTCATCCTGTGGAATTTCCTCTTCCGGCACCTATTGCTGAACCTATCCCTGATATCATTTCGGAGCCACAAGTTCAGTGTCATGGAGTTGAAAGTCCAATTCCAGCTTCAGTTCTGCCCGAGGACATTGATAACATCGGGGATTCCAATAAAGAGGTAAAAGCTTTAGCATCAGAGAAAATTGAAGATGAAGCAGTGACAGTTGGTTCAGAAAGTATAAAAGAAAATGGTAATCCAAATTTTGCCAGGATGGAAAATGCTGGGAGCAAGCCAAATCAAAACATTGGCTTGAATGGAAGCACTAGCTCTAGTGAAACGAACATGGATAATGAGAAAACGTTCAGCATTTTGATTCGGGGAAGAAGAAATCGAAAGCAGACTCTGAGAATGCCAATAAGTTTGCTTACACGACCTCATGGATCTCAGTCATTTAAGAATGTGGCATTTCAATCATTTGTGGGATTCAATTACAAATTGCGCTCCCTCATCATCAGCTTCAGTTTTATAGCTGCGCTATCTTTTGGGAGGTTTCCGATGACTCTATTTAAGATGGAGGCTTGGAGGAGGCTTTTCTTCAATTGA 5775 0.4289 MEDEAALEDALDSVVKPTSSSGSTDSDGREAGINPSSGVQKYECQYCCREFTNSCIKGPAFCSLELKMAPRNSRGKAKGEKKKKEEKVLPVVMDITVNLLDETHVVLKGISTDRIIDVRRLLSVNMETCYITNFSLSHEVRGPRLKDTVDVSALKPCVLTLVEEDYDEERAVSHVRRLLDIVACTTSFGPSSPPKNAAAATSPKSTESQTPAAADGDGEISHSCPKLESFYEFFSLSHLTAPLQYVKKASRRHVEEISDADYLFSLDVKLCNGKVVHVEACRKGFYSVGKQRILCHNLVDLLRQLSRAFDNAFDDLLKAFSERNKFGNLPYGFRANTWLIPPIAAQSPSCFPPPPLEDETWGGNGGGLGRDGKFDLIPWANKFSFIASMPCKTAEERQVRDRKAFLLHSLFVDVAIFRAIRAVKHVMEEPNSCSVAENDIIYTERVGDLSIRVFKDASVASCKIDTKIDGVEATGVNQKDLVERNLLKGITADENTAAHDITTLGVVNVRYCGYVVVVKVEGGVNENVNSPSDQDIELFDQPEGGANALNINSLRLLLHSTTQPENNKQMTQIHMFENEELGGSHAFVEKLIKESVAKLEEEEPGLNYFVRWELGACWIQHLQDQNSTEKDKKTSLEKAKNEMKVEGLGKPLKPLKNNKKKTDSNNTNFASEYSKSKQEAENAPLPSIESHHETTAADNELVLKAMLSEAAFTRLKESGTGLHCKSMQDLIDSSRKYYMDVAIPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHIMRTVISSVVDKEKMASSIAVTLNLLLGVPENRESDKSCEVHPVVWTWLELFLKKRFDWDLNRLNYKDVRKFAILRGLCHKVGIELVPRDFDMDSPFPFQKSDIVSLAPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHIALRYLHKALKCNQRLLGADHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRVKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPNHDTKGRDATAKRRSQIIKVRATSNQNIFSASSDDSSKEIQKEASDEEVPIPEPGGSADSEHESNSASDSEQPILEKISDEKLQVSGETLSEAHADGEDGWQPVQRPRSAGSYGQRLKQRRATLGKVYSYQKNVEVGTEYPVMKSANQNSRYYFLKKRTTYHGGYTDNHNVNITQGTKFGRKVVKAVAYRVKSMPSASKTAANETLEIDDKLVSSPSESETNDVNPVKTSIVSLGKSPSYKEVALAPPGTISKLQVYNPQSEIPESREHDVGEHEEKDVEAHRIINPTPKEVNDMFKEKYDDSLSESVDDSTDDTVVATEKKEETQLINVVQDNCASAEELQSEDVEAQGAVDNGIVIDAEEDPVDSYKQELNATNSSGSFEPSDNANSNSQGGEDLRVNISSSSQGHVGGISNKKLSASAAPFNPSPAIARAAPIPMNITLPSGPGAVPAIGPWPVNMNVHPGPATVLPAGSQMCSSPHHAYPSPPTTPNMIQPLPFMYPPYTQPQSVPTSNFPVTSSAFHANHFAWQCNLNHTISKFGPSAVWPGCHPVEFPLPAPIAEPIPDIISEPQVQCHGVESPIPASVLPEDIDNIGDSNKEVKALASEKIEDEAVTVGSESIKENGNPNFARMENAGSKPNQNIGLNGSTSSSETNMDNEKTFSILIRGRRNRKQTLRMPISLLTRPHGSQSFKNVAFQSFVGFNYKLRSLIISFSFIAALSFGRFPMTLFKMEAWRRLFFN* 1925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01631 1924 Gene3D Tetratricopeptide repeat domain 924 1178 IPR011990 GO:0005515
Rops4g01631 1924 ProSiteProfiles TPR repeat profile. 968 1001 IPR019734 GO:0005515
Rops4g01631 1924 SUPERFAMILY TPR-like 1005 1133 IPR011990 GO:0005515
Rops4g01631 1924 MobiDBLite consensus disorder prediction 1 34 - -
Rops4g01631 1924 MobiDBLite consensus disorder prediction 1276 1300 - -
Rops4g01631 1924 MobiDBLite consensus disorder prediction 189 220 - -
Rops4g01631 1924 Pfam Mitochondrial function, CLU-N-term 112 182 IPR028275 -
Rops4g01631 1924 SUPERFAMILY TPR-like 934 1039 IPR011990 GO:0005515
Rops4g01631 1924 SUPERFAMILY Hypothetical protein c14orf129, hspc210 236 325 IPR023231 -
Rops4g01631 1924 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 923 1173 - -
Rops4g01631 1924 MobiDBLite consensus disorder prediction 1557 1596 - -
Rops4g01631 1924 MobiDBLite consensus disorder prediction 625 649 - -
Rops4g01631 1924 MobiDBLite consensus disorder prediction 1210 1255 - -
Rops4g01631 1924 MobiDBLite consensus disorder prediction 1816 1838 - -
Rops4g01631 1924 SMART tpr_5 1010 1043 IPR019734 GO:0005515
Rops4g01631 1924 SMART tpr_5 968 1001 IPR019734 GO:0005515
Rops4g01631 1924 SMART tpr_5 1052 1085 IPR019734 GO:0005515
Rops4g01631 1924 MobiDBLite consensus disorder prediction 661 683 - -
Rops4g01631 1924 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 76 1485 IPR027523 GO:0006996
Rops4g01631 1924 MobiDBLite consensus disorder prediction 189 212 - -
Rops4g01631 1924 ProSiteProfiles Clueless (Clu) domain profile. 357 633 IPR025697 -
Rops4g01631 1924 CDD CLU-central 757 898 IPR033646 -
Rops4g01631 1924 Coils Coil 619 642 - -
Rops4g01631 1924 Pfam Tetratricopeptide repeat 1051 1125 - -
Rops4g01631 1924 Pfam Tetratricopeptide repeat 967 1037 - -
Rops4g01631 1924 MobiDBLite consensus disorder prediction 624 686 - -
Rops4g01631 1924 MobiDBLite consensus disorder prediction 14 34 - -
Rops4g01631 1924 Pfam Translation initiation factor eIF3 subunit 135 755 897 IPR033646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01631 Rops-Chr4 39710387 39727464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01631 K03255 - gmx:100808136 2878.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01631 4 39710387 39727464 Rops4g01631 4 39710387 39727464 ECH