Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01627 ATGGGACTTGGATTGATCATCGTTACACTCATCACTGCCATAATTGTAAGATTTTGTTTTGGCCCTATCAATGGGAGACGTAAGAGAGAGAGTGCGGTGGGGTTCTTCCACCCTTACACCAACGACGGTGGCGGCGGTGAAAGGGTGCTATGGTGCGCCGTCAGAGCCATCCAAGAAGAGAATCCTAACCTTCACTGTGTTGTATACACCGGAGATCACGATGCCACTCCTCAAACCTTGATGGGTCGAGCCCTTGATCGATTTGGGGTCACTCTCCTCTCTCCTCCTAAAGTGGTGCATTTGTACAAGAGAAAGTGGATTGAAGAAACCACTTATCCACACTTTACTATGATTGGTCAAAGTCTGGGCTCTATGTATCTTGCATGGGAAGCTTTGTGCAAGTTTACCCCTTTATATTATTTTGATACAAGTGGATATGCTTTTACTTATCCACTTGCCCGGTTGTTTGGATGCAAAGTTATTTGCTATACACATTACCCTACTATCAGTACAGACATGCTATCTCGTGTTCGTCAACGCAGCTTGATGTATAATAATGATGCCTTGGTTGCAAAAAGCATTTGGCTTTCTCGGTGCAAAATAGTCTATTATACATTCTTCAGCTTCTTGTATGGGATTGTTGGATCTTGTGCACACCTAGCTATGGTCAATTCATCTTGGACCAAATCCCATATTGAAACGCTTTGGGGAGTTCCTGATCGGATTAAGCGAGTCTATCCTCCTTGTGATACTTCAGGACTTCAGGTGCTTCCTTTGGAAAGATCAGCTGAAATTCCTGTAATAATATCTGTTGCACAATTTCGACCGGAGAAGGCTCACAGTCTCCAACTTGAGGCCTTTTCAGCTGCCATTAAGAGATTAGACTCTGGTTTACCAAAACCTAAGCTCCAGTTTGTGGGCAGCTGCAGAAATAAATCAGATGAGGAAAGACTTCAAATGTTAAAAAATAAAGCGATTGAGCTGAATGTGAATGAACAAGTGGAATTTCACAAGAATGTAACATACAGAGATTTGGTGGGACTTTTAGCGGGTGCTGTTGCTGGCATCCATTCCATGACAGATGAGCATTTTGGCATTAGTGTTGTAGAGTATATGGCTGCTGGTGCCATCCCAATTGCTCATAATTCTGCTGGCCCAAAAATGGACATTGTATTAGATGAAGATGGACAACAAACTGGATTCCTTGCCAACACTGTTGAAGAATATGCAGATGCTATGTTGAGAATTATAAAGATGCCAGAGATGGAGAGGCTTAAGATGGCTGCAGCTGCAAGGGAACGAGCAAGTAGATTTTCTGAGCAGAGGTTTTGTGATGACTTCAAAGCTGCAGTACGCCCTATTCTGTGTCATAATTCTAGATGA 1383 0.4302 MGLGLIIVTLITAIIVRFCFGPINGRRKRESAVGFFHPYTNDGGGGERVLWCAVRAIQEENPNLHCVVYTGDHDATPQTLMGRALDRFGVTLLSPPKVVHLYKRKWIEETTYPHFTMIGQSLGSMYLAWEALCKFTPLYYFDTSGYAFTYPLARLFGCKVICYTHYPTISTDMLSRVRQRSLMYNNDALVAKSIWLSRCKIVYYTFFSFLYGIVGSCAHLAMVNSSWTKSHIETLWGVPDRIKRVYPPCDTSGLQVLPLERSAEIPVIISVAQFRPEKAHSLQLEAFSAAIKRLDSGLPKPKLQFVGSCRNKSDEERLQMLKNKAIELNVNEQVEFHKNVTYRDLVGLLAGAVAGIHSMTDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLDEDGQQTGFLANTVEEYADAMLRIIKMPEMERLKMAAAARERASRFSEQRFCDDFKAAVRPILCHNSR* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01627 460 PANTHER GDP-MAN:MAN(3)GLCNAC(2)-PP-DOL ALPHA-1,2-MANNOSYLTRANSFERASE 26 457 IPR038013 GO:0004377
Rops4g01627 460 FunFam GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase 257 438 - -
Rops4g01627 460 CDD GT4_ALG11-like 32 446 IPR038013 GO:0004377
Rops4g01627 460 Pfam Glycosyl transferases group 1 266 433 IPR001296 GO:0016757
Rops4g01627 460 Coils Coil 311 331 - -
Rops4g01627 460 Gene3D Glycogen Phosphorylase B; 254 438 - -
Rops4g01627 460 Pfam ALG11 mannosyltransferase N-terminus 32 236 IPR031814 -
Rops4g01627 460 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 35 452 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01627 44 443 Glycosyltransferase AT1G78800 24.515 1.49e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01627 K03844 - gmx:100808662 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01627 4 39642130 39647214 Rops4g01627 4 39642130 39647214 ECH