Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01625 ATGAAGAACTTGCAGAGCACAGAAGAATTACAGTCATCAACTCAAGCTTCTCTTGAGCCCAAGAGTGAACAACCAAACAATCACACAACTGATGCTCCGGTTACAGATTCAGGTTCAGCATCTGCTTCAAGCAATGATAGCAAAAAGGTTTCACGGCAGGATATTGAGCTTGTCCAGAATTTAATAGAAAGATGCCTGCAATTATATATGAATAAAGATGAAGTGGTTAAAACACTACTGACTCGAGGAAAGATAGATCCTGGATTTACAACTCTTGTATGGCAGAAGTTGGAAGAAGAGAATGCCGATTTCTTCAGAGCCTACTATATTAGGCTAAAATTGAAAAAGCAAATACTTTTATTCAATCATTTACTTGAGCATCAGTATCATCTGATGAAGTGTCCCATGCCTGCAAAGGTTCCATTGGCTCCAATGCAAAATGGAATCCATCCGATGCCTGTCAACAACCTACCTATGGGATACCCAGTGCTACAGCAGCCTCCCATTCCAGCAACAGGTCAACCTCATATTGACTCCATGGGTTGCGGTATATCTAGTTGTCATGTGGTTAATGGAGTCCCTGCACCGAGCAATTTTCATCCCATTCGGATGAATTCTGGGAATGATATGGTGATGGACCACAGTGCTCCGGATATGGCTCCTGTTATTCCACCAAATGGTGCAATCTCATCTGTCTCAGATATGCCAGTGAGTCCGACATCAGTAGCATCCAGTGGTCATTTCCCCTTCACCGCATCGGAAATATCAGGAATGGGCACAGATGCATCAGCTCTTGATACGGCATTTACATCTGACGTGGCCAGTTCTGTAGGACTACAGCTTGCACCAGATGGTGGCACCGGAATTTCTAGATCGCTGGATCAAATTCCATGGAATTTTAGCCTATCTGATCTAACAGCAGATTTGCCAAACTTGGGAGATCTAGGTGCTCTGGGAAACTATCCTGGTTCACCATTTTTGGCATCTGATTCAGACATTTTGCTTGAATCTCCGGATCAACAGGATATAGTGGATGACTTCTTTGTTAATTCTGAGCCTCCATGCTCTCAATCAGACGAGGAGAAATCTTAA 1092 0.4332 MKNLQSTEELQSSTQASLEPKSEQPNNHTTDAPVTDSGSASASSNDSKKVSRQDIELVQNLIERCLQLYMNKDEVVKTLLTRGKIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQILLFNHLLEHQYHLMKCPMPAKVPLAPMQNGIHPMPVNNLPMGYPVLQQPPIPATGQPHIDSMGCGISSCHVVNGVPAPSNFHPIRMNSGNDMVMDHSAPDMAPVIPPNGAISSVSDMPVSPTSVASSGHFPFTASEISGMGTDASALDTAFTSDVASSVGLQLAPDGGTGISRSLDQIPWNFSLSDLTADLPNLGDLGALGNYPGSPFLASDSDILLESPDQQDIVDDFFVNSEPPCSQSDEEKS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01625 363 NCBIfam TIGR01589 domain 55 111 IPR006476 -
Rops4g01625 363 PANTHER OS02G0137100 PROTEIN 45 312 IPR006476 -
Rops4g01625 363 MobiDBLite consensus disorder prediction 1 49 - -
Rops4g01625 363 Pfam Plant protein 1589 of unknown function (A_thal_3526) 58 109 IPR006476 -
Rops4g01625 363 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01625 Rops-Chr4 39612805 39619989 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01625 - - gmx:100809603 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01625 4 39612805 39619989 Rops4g01625 4 39612805 39619989 ECH