Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01614 ATGGCGAGAATTAAGCATACTCCAGCTTTTAAACGCGTTCGAAAGAAATCGCAATCCACAACCACACCCGCATCACCACCACCACCACAATCCCAATCTCCTGGTCGTAGAGGCAGGGGGAGGAGGACTGAACAAGGGGAACCTCAATCACCTGGGACTCAGGGGAGGAAGAAAAGGCGAAATAGACCAGGAACAGTGGCACTTCGCGAGATTCGTCATTTTCAAAAGACTTTCAAGCTTCTTATCCCTGCTGCACCCTTTATAAGATGTGTCAAACAGATTACGAATCAATTATCTACGCAGGTCTCTCGCTGGACACCTGAAGCTGTGGTGGCACTTCAGGAGGCAGCTGAGGATTATCTGGTTAAATTGTTTGAAGATGGAGTGCTCTGTGCAATTCATGCAAAGCGTGTTACCCTTATGAAAAAGGATATTGAGTTGGCTCGTAGGCTTGGAGGAATAGGAAGGCCTTGGTGA 477 0.478 MARIKHTPAFKRVRKKSQSTTTPASPPPPQSQSPGRRGRGRRTEQGEPQSPGTQGRKKRRNRPGTVALREIRHFQKTFKLLIPAAPFIRCVKQITNQLSTQVSRWTPEAVVALQEAAEDYLVKLFEDGVLCAIHAKRVTLMKKDIELARRLGGIGRPW* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01614 158 FunFam Centromeric histone 3 1 155 - -
Rops4g01614 158 PRINTS Histone H3 signature 12 26 IPR000164 GO:0000786|GO:0003677|GO:0030527
Rops4g01614 158 PRINTS Histone H3 signature 134 155 IPR000164 GO:0000786|GO:0003677|GO:0030527
Rops4g01614 158 PRINTS Histone H3 signature 118 134 IPR000164 GO:0000786|GO:0003677|GO:0030527
Rops4g01614 158 PRINTS Histone H3 signature 77 94 IPR000164 GO:0000786|GO:0003677|GO:0030527
Rops4g01614 158 MobiDBLite consensus disorder prediction 1 64 - -
Rops4g01614 158 Pfam Core histone H2A/H2B/H3/H4 17 151 IPR007125 GO:0003677
Rops4g01614 158 SMART h35 53 156 IPR000164 GO:0000786|GO:0003677|GO:0030527
Rops4g01614 158 SUPERFAMILY Histone-fold 33 154 IPR009072 GO:0046982
Rops4g01614 158 Gene3D Histone, subunit A 3 154 IPR009072 GO:0046982
Rops4g01614 158 PANTHER HISTONE H3 1 153 IPR000164 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01614 Rops-Chr4 39449463 39454888 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01614 K11253 - gmx:100811872 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01614 4 39449463 39454888 Rops4g01614 4 39449463 39454888 ECH