Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01609 ATGGAGGACTCAACCAAGCTGCGATTGGTGAGGTGCCCCAAGTGTCAAAATCTCCTTCCTGAGCTTGCTGGTTATTCTGTTTATCAATGTGGTGGTTGTGGTGCTGTTCTTCGAGCTAAGCTTAATGGTTATGGAAGTGGTAGCTTGTGGGAGATGTCTGATGAGGAAAAGGGTGGAGGAGATCCTGCTAAATCAGGAAATTCCTTGGGGAAAGGGTTAGTTGATTTGGGTGATAATTCAGATGTTGATGTTAAGTCCAACTGTGGTTCCTCAGGGTTGAATCAAAGGGGTTCAGTGAAACCAAATAAGGGACATGAGAGGATTTTGAATCATTCTGAGGATGGTGATGAGAAAGGGGTTTTGGAGAATGATTTTGATGTCAATAGAAACAAAAATGAAAGGGGTAAATCAATCGGAAAAGAGCAGCAGGAACAGAAGTCTCAAATGGGAGGGTCCAATTGGCCCAATGGGGAGAGAAGTGAGATGGAGGGGTTTTGGAGAAAGCCATCAGCTGATATGGAAGGTGTGAGATTTTCCACTTTGAATTATCCTGATGAGGGAACTTCAAATGGCTATTCTAGTTTTCCTTATGGGGAACAATGGAGGAATTATAAAGACATGGATGGTGTTAACAGGGTTCAACACCTTGAGCAAGATCGAGCTGAGCTTCTAAGGAAGCTGGAAGAGTTATCAATGCAACTGAACCAGTCTTCTGAAGTGGTTAATAACCCTAAAGAAAAAATTCATCCTAATGGAAAGATGGTTCCTCCAGATCCTTACAGTGGCCCTGATGCTTGGTTTCCAGATGGATCATCAGGGTTGAATAGGACCTCAAGGCAATTCTTTGGCCCTAACAAACATGTGGCAGGTCCCCCTTATTTCAATTATCATCATGATCCATATGCTTATACAAATAGTCATGAAATGGCTATGCTCAACTTCCCCTCTTCAATGCGTAACCCAAATTATTTTTCTGGATATAGGGATCCTTTTGTACCCCAAATGATGAGAGGTTCACATCCATTACCCCATCAGTTCCCACAACAACCAATGCATCGCTACTTTCCCGGACCTTACGCTGATGCTAGTTCAGATTCATATGAACCATATGCACATAATGCTATGCCTCACCCACCTTCTTGCTCTTGTATTCGTTGCTATGACAGCAAAAGAAGAGGTCCAGTGCCAGCACCACCTGCTGCATTCATCAACAGCAGATTCCCTCATAACCCAAGCGATCCTATGTTATACCATCATGAGATCCCAGGGGCTGTTGGTCCACAGGTTCATAATTCTAGAACTGCCATTCCTGCTGCGAGTCTTCACGAAAAACAGTTACACACACGATGGCCTGATGAGATAGGTGGGTTTGTTCGAAACCGTCCTCGAAAACTAATGCCAGATAGTGGTAGTCAGCATTGCCAGCCTATAGCTGGTGGTTCTCCTTTCATCACATGTTATAATTGCTTTGAGTTACTGCAACTGCCTAAAAAATCACTGATTATGGTGAAAAAACGTCAGCAGAAAGTGCAATGTGGGGCTTGTTCTTCAGAAATAAATTTTGCTGTCATCAATAAGAAGCTAGTTGTTTCTCCTCATCAAGAAATGAAGGAAACTACCACAAGGATCGATGAGACCTCTAATGAGGTTGTGAATAGCCATGTGTCCCATTCCCATGGTCATGTGAACACAACAGGTGTTAACTTCTCATCTGATGATTATTCTGGTTATGATTTTCACTCGGTAGATAGAGAATCTCCTGTGCTGGCTGCAGACCCAAGCTTTAACTCTAGCAAATCCCGGGAGATGCAAAGTTTCCATTCTTCATCTCCCAGTACCTCTGAAGATGAAAATGGTCCAGAAGTTATGATTACACCAGATGAAGCCACTAAGTCCATTGATCAGCCAAATAAATCCTCTTTGTCCCCTCCACCTGCTGGCTCACCTCTTCAAGAGTATTTAGATTATTCTAGTAATAACCATGCAATAAATCGGTTTGGGAAAGGCAACCAAAGTAGTCGCTCAGATAAAGAGAAGGTGAAAATGGAAAAGAATAATTCAAGGCAAAATTCTTTGAAAGAGGTAGTGCTTGCAACTGAGATGGATGTCCATGATTATTCTAACACTGGGGTATCACAGGACTCTGGTGATGCAAGCCGAGAACATGATCATCCTAAATCTAACAAAGGGGGTGAATCAGTTTTTGCAAACTTTATCAAGAAAGGCTTCCGGGATTTCTCCCAATCTAATCAAATAGATGATTGTGGGAAATGTAATGTTACTATAAATGGATGTCCAATATCAGATCGTGTGATTAAGAAGGCTGAAAAGTTAGCTGGACCAATCCAGCCAGGAAATTACTGGTATGATTTTCGGGCTGGATTTTGGGGTGTCATGGGTGGACCGTGTCTTGGAATAATTCCATCATTCATAGAAGAATTCAATTATCCCATGCCAGATAAATGTGCTGGTGGAAACACTGGTGTTTTTGTAAATGGTAGGGAACTTCACCAAAAAGATTTAGATTTGCTTTCTCGTAGAGGACTTCCTCATGATAGCGATAGATCTTATATCATTGAAATTTCTGGGAGAGTCCTGGATGAAGACACGGGAGAAGAGCTAGACAGCCTTGGCAAACTTGCACCAACAGTGGAGAAAGCAAAGCATGGATTTGGCATGAAAGTACCCAGAGCAGCTGCATAA 2703 0.4243 MEDSTKLRLVRCPKCQNLLPELAGYSVYQCGGCGAVLRAKLNGYGSGSLWEMSDEEKGGGDPAKSGNSLGKGLVDLGDNSDVDVKSNCGSSGLNQRGSVKPNKGHERILNHSEDGDEKGVLENDFDVNRNKNERGKSIGKEQQEQKSQMGGSNWPNGERSEMEGFWRKPSADMEGVRFSTLNYPDEGTSNGYSSFPYGEQWRNYKDMDGVNRVQHLEQDRAELLRKLEELSMQLNQSSEVVNNPKEKIHPNGKMVPPDPYSGPDAWFPDGSSGLNRTSRQFFGPNKHVAGPPYFNYHHDPYAYTNSHEMAMLNFPSSMRNPNYFSGYRDPFVPQMMRGSHPLPHQFPQQPMHRYFPGPYADASSDSYEPYAHNAMPHPPSCSCIRCYDSKRRGPVPAPPAAFINSRFPHNPSDPMLYHHEIPGAVGPQVHNSRTAIPAASLHEKQLHTRWPDEIGGFVRNRPRKLMPDSGSQHCQPIAGGSPFITCYNCFELLQLPKKSLIMVKKRQQKVQCGACSSEINFAVINKKLVVSPHQEMKETTTRIDETSNEVVNSHVSHSHGHVNTTGVNFSSDDYSGYDFHSVDRESPVLAADPSFNSSKSREMQSFHSSSPSTSEDENGPEVMITPDEATKSIDQPNKSSLSPPPAGSPLQEYLDYSSNNHAINRFGKGNQSSRSDKEKVKMEKNNSRQNSLKEVVLATEMDVHDYSNTGVSQDSGDASREHDHPKSNKGGESVFANFIKKGFRDFSQSNQIDDCGKCNVTINGCPISDRVIKKAEKLAGPIQPGNYWYDFRAGFWGVMGGPCLGIIPSFIEEFNYPMPDKCAGGNTGVFVNGRELHQKDLDLLSRRGLPHDSDRSYIIEISGRVLDEDTGEELDSLGKLAPTVEKAKHGFGMKVPRAAA* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01609 900 MobiDBLite consensus disorder prediction 83 98 - -
Rops4g01609 900 Coils Coil 213 240 - -
Rops4g01609 900 MobiDBLite consensus disorder prediction 591 619 - -
Rops4g01609 900 MobiDBLite consensus disorder prediction 630 670 - -
Rops4g01609 900 MobiDBLite consensus disorder prediction 671 688 - -
Rops4g01609 900 MobiDBLite consensus disorder prediction 706 732 - -
Rops4g01609 900 MobiDBLite consensus disorder prediction 590 692 - -
Rops4g01609 900 Pfam Probable zinc-ribbon domain 478 523 IPR021480 -
Rops4g01609 900 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 1 892 IPR040244 GO:1900150
Rops4g01609 900 MobiDBLite consensus disorder prediction 536 564 - -
Rops4g01609 900 MobiDBLite consensus disorder prediction 545 564 - -
Rops4g01609 900 MobiDBLite consensus disorder prediction 52 162 - -
Rops4g01609 900 MobiDBLite consensus disorder prediction 100 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01609 Rops-Chr4 39383737 39389541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01609 - - aprc:113849738 1474.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01609 4 39383737 39389541 Rops4g01609 4 39383737 39389541 ECH