Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01606 ATGACTACAAATGGAGGGACTGGAAATGAGGAGCACAAGAGGGAAACTAATGATCCTTTTCTCAAGTCAAATGGACACCAAAATATGCCAAGGTCACCTAGATTGTGTACACCTATTAGGAAGGACTGGCCAGAGAGTTTTCCAAATGACAATGTGATTGGTAATGAGGATAACAGTTTGAGTAGGTATATTACTTCCTTTCCTGGATCTGGACCTCCTAGTACTAGTTTTTGTTCCACCACAGATTCTGAACACATTGGTGAAGAGTTACCTGTTAAGAATTATAAGAACCCAAATATAGCTTTAGTTAGCCACCCTCATAATTCCAGACAGCCTCAGAGGAATCAATTAGCTTATAATAGCTTTAGTAGAGACATTGCACCAAGGGTTGAAGAACAGATACCACTCAGATTAAGCAAAGGACTTAAGGGAATTGATTCTGAATTTTGGGGCCTGGAGTCACTGTCTAGTAAGAATGTAAATCATGACACAAAGAAAGTCTTTGCAAATATAAGCAATAGGGACAAGACTATCACCTCAAGCAATGCACATCTTATTAGCAGTATTACACAGAGTACTGCATCTACATATGGTTATCCTCAATTGATTGTAGAGCAAACAATGAAGGGAAAGGGTGTTATTGGCAAGGATTTAGACAAAAGTCTCAGTCTTGGAGGATCACTTGTGAACCAGGAGGATGAGAAACCAGCTTTTGAAACTAAGTTTCAATCCGATACATTGCTGAGATCAAATGTTGATGATAGTAATATGCCTTCCTTGCAAGGAACTTTCATGTCTGGTGCTGAATCTTTTAATGGTGGACTCAACTTAAGAGAGTGGATGAAGTCTGAAGGTCATAAAATGAATAAATCAGGAAGGCTACGTATATTTAAGCAGATCTTGGAAATGGTTGATTTTGCACATTCCCAAGGAGTTTTCTTGCAAGACTTGAGACCATCTTGTTTCACTTTATTGCCTTCAAGTAAAATTAAATACATTGGTTCATTTGGCCAACAAGAGTCAGATAACAAAGTCATGACCTGCAATGTGACTAGGAAAAGGCCTCTGGAACAGGATATCTCTGCTAGCCTAAGTTTGAATACAAAGAAGAAAAATATCTTTGAGGAGACAATATCTCTTAGGCAGCAGCATCACTTCAGTGGTATTCATGGCTGCAGGACTCCATCAGTGAATCAAACCGACTCTGACACAAAAGCGCCCATTGAAGCAAGGAGTAAAGAAAGCCTCCGCCAAGATGGCTCTAGTTGTCAGCATACTTCTACAGAAGAAAAACAGTTTTTGTCTCTAACCATTCAGTTAGAAGAGAAGTGGTATTGTAGTCCAGAAGTGCTCAATGATGAAGTTTGCACATTTTCATCAAATATTTATAGCCTTGGAGTTCTTCTTTTTGAGTTGCTGTGCAATATCGAGTCATTGGAAGCGCAGTCAGCTGTGATGATGGATTTGAGTCATAGAATCTTACCGCCAAAATTTCTATCAGAAAATCCAAAGGAAGCTGGTTTTTGTCTTTGGCTTCTGCATCCTGAACCTTCTTCTAGCCCCAATACCAGGATGATTTTAGAATCTGAATTTATGCGTGAATCTGAAGAATCAACTTCTGGAGATGAAGTTGTAGTATCTGAAGATGATGAGGCTGAAACAGAACAATTATTACATTTTTTAATTTCAGTTAAAGAAGAAAAGAAAAAACTGGAAGCCAAATTGGCTGAAGAGCTAAATTTCCTGGAAGAAGATATTAAGGAGGTAGAAAGAAGTTTTTCACATGGGACAGGTTCATTATTTCCTTTGGCGCAAATGAACTATCCTGATTTGACAGGAAACAATTTACATTTTCAATATCCTTCCAGTTCAGATAGTAGTAGATCTCTTACAAGTTCCTTTGTTGATGAAGCAAGACTTATGAGTAATATCAATCAGCTAGAGAATATTTACTTTTCCATGAGATCCCAAGGCCTGCTCAAAGAGGCTTCAGCTGTTGCAAGTGATGATAAAAATGTCATGGAAAATAGATGGAGATCACCTCATGTAGAGAATGTTAGTAAAGAGCCAAGAAGAATTCAGAGTTCTGTTGATCGTCTAGGATCCTTCTTAGAAGGTTTATGCAAGTTTGCTCGTTACAGAAAGTTTGAAGAGCGTGGTACATTAAGAAATGGAGATCTGCTTAGTTCTGCCAATGTAATATGTGCTTTAAGTTTTGACCGTGATGAGGATTACATTGCAGCAGGTGGAGTTTCAAAGAAAATAAAGGTTTTTGACCTGAATACTATTTCAAGTGATTCTATTGATATCCAGTACCCCGTTGTTGAGATGTCAAATAAATCAAAGCTTAGCTGTGTGTGTTGGAACAGTTATGTAAGAAATCATCTGGCATCTACTGACTATGATGGTGTGGTTCAGATGTGGGATGCAAGCACTGGTCAGCCATTGTCTCAATACATGGAGCACCAAAAGAGAGCTTGGTCTGTTCACTTTTCTCTGTCAGACCCAAAAATGTTTGCTAGTGGAAGTGATGACTGCTCTGTCAAACTCTGGAATATCAGCGAGAGAAATTCTCTAGGAACCATCTGGAACCCTGCCAATGTATGTTGTGTTCAGTTCTCTGCTTACTCTACACATCTTTTATTTTTTGGATCAGCTGATTACAAGGTGTATGGTTATGATCTTCGTCACACTAGAACCCCTTGGTGCACATTAGCTGGTCATGGAAAAACCGTTAGCTATGTAAAATTTCTAGATGCTGAAACAGTTGTCTCAGCTTCCACTGACAACTCCTTGAAGCTGTGGGACCTGAAGAAAACCAGCTCTTCTGGAGTGTCATCTGATGCTTGTGGCCTAACCTTTAAAGGCCATAGTAATGAGAAGAATTTCGTGGGTTTATCTGTTTGGGACGGACATATTGCATGCGGTTCAGAATCTAATGAGGTATACTGTTATCACAAATCTCTACCGATGCCGATCGCTTCTCATAAATTTGAGTCAGTTGATCCCATTTCTGGTCATTCAAATAGTAGTGACAATAATGGACAGTTTGTTTCTAGTGTCTGCTGGAGAAAGAAATCTAACATGCTTGTTGCTGCCAACTCAGTTGGAATTGTGAAACTACTGCAGATGGTTTGA 3138 0.3907 MTTNGGTGNEEHKRETNDPFLKSNGHQNMPRSPRLCTPIRKDWPESFPNDNVIGNEDNSLSRYITSFPGSGPPSTSFCSTTDSEHIGEELPVKNYKNPNIALVSHPHNSRQPQRNQLAYNSFSRDIAPRVEEQIPLRLSKGLKGIDSEFWGLESLSSKNVNHDTKKVFANISNRDKTITSSNAHLISSITQSTASTYGYPQLIVEQTMKGKGVIGKDLDKSLSLGGSLVNQEDEKPAFETKFQSDTLLRSNVDDSNMPSLQGTFMSGAESFNGGLNLREWMKSEGHKMNKSGRLRIFKQILEMVDFAHSQGVFLQDLRPSCFTLLPSSKIKYIGSFGQQESDNKVMTCNVTRKRPLEQDISASLSLNTKKKNIFEETISLRQQHHFSGIHGCRTPSVNQTDSDTKAPIEARSKESLRQDGSSCQHTSTEEKQFLSLTIQLEEKWYCSPEVLNDEVCTFSSNIYSLGVLLFELLCNIESLEAQSAVMMDLSHRILPPKFLSENPKEAGFCLWLLHPEPSSSPNTRMILESEFMRESEESTSGDEVVVSEDDEAETEQLLHFLISVKEEKKKLEAKLAEELNFLEEDIKEVERSFSHGTGSLFPLAQMNYPDLTGNNLHFQYPSSSDSSRSLTSSFVDEARLMSNINQLENIYFSMRSQGLLKEASAVASDDKNVMENRWRSPHVENVSKEPRRIQSSVDRLGSFLEGLCKFARYRKFEERGTLRNGDLLSSANVICALSFDRDEDYIAAGGVSKKIKVFDLNTISSDSIDIQYPVVEMSNKSKLSCVCWNSYVRNHLASTDYDGVVQMWDASTGQPLSQYMEHQKRAWSVHFSLSDPKMFASGSDDCSVKLWNISERNSLGTIWNPANVCCVQFSAYSTHLLFFGSADYKVYGYDLRHTRTPWCTLAGHGKTVSYVKFLDAETVVSASTDNSLKLWDLKKTSSSGVSSDACGLTFKGHSNEKNFVGLSVWDGHIACGSESNEVYCYHKSLPMPIASHKFESVDPISGHSNSSDNNGQFVSSVCWRKKSNMLVAANSVGIVKLLQMV* 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01606 1045 Gene3D Transferase(Phosphotransferase) domain 1 274 543 - -
Rops4g01606 1045 ProSiteProfiles Protein kinase domain profile. 186 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01606 1045 ProSitePatterns Trp-Asp (WD) repeats signature. 923 937 IPR019775 -
Rops4g01606 1045 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 905 938 - -
Rops4g01606 1045 SMART serkin_6 196 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01606 1045 ProSiteProfiles Trp-Asp (WD) repeats profile. 776 818 IPR001680 GO:0005515
Rops4g01606 1045 PANTHER PROTEIN SPA1-RELATED 2 19 1045 IPR044630 GO:0009640
Rops4g01606 1045 SMART WD40_4 898 936 IPR001680 GO:0005515
Rops4g01606 1045 SMART WD40_4 770 809 IPR001680 GO:0005515
Rops4g01606 1045 SMART WD40_4 724 759 IPR001680 GO:0005515
Rops4g01606 1045 SMART WD40_4 812 852 IPR001680 GO:0005515
Rops4g01606 1045 SMART WD40_4 997 1043 IPR001680 GO:0005515
Rops4g01606 1045 SMART WD40_4 855 894 IPR001680 GO:0005515
Rops4g01606 1045 SMART WD40_4 947 986 IPR001680 GO:0005515
Rops4g01606 1045 ProSitePatterns Trp-Asp (WD) repeats signature. 796 810 IPR019775 -
Rops4g01606 1045 Gene3D - 704 1045 IPR015943 GO:0005515
Rops4g01606 1045 SUPERFAMILY Protein kinase-like (PK-like) 238 535 IPR011009 -
Rops4g01606 1045 Coils Coil 565 592 - -
Rops4g01606 1045 PRINTS G protein beta WD-40 repeat signature 923 937 IPR020472 -
Rops4g01606 1045 PRINTS G protein beta WD-40 repeat signature 839 853 IPR020472 -
Rops4g01606 1045 PRINTS G protein beta WD-40 repeat signature 796 810 IPR020472 -
Rops4g01606 1045 ProSiteProfiles Trp-Asp (WD) repeats profile. 905 945 IPR001680 GO:0005515
Rops4g01606 1045 ProSiteProfiles Trp-Asp (WD) repeats profile. 819 861 IPR001680 GO:0005515
Rops4g01606 1045 Pfam WD domain, G-beta repeat 814 852 IPR001680 GO:0005515
Rops4g01606 1045 Pfam WD domain, G-beta repeat 904 936 IPR001680 GO:0005515
Rops4g01606 1045 Pfam WD domain, G-beta repeat 734 759 IPR001680 GO:0005515
Rops4g01606 1045 MobiDBLite consensus disorder prediction 1 38 - -
Rops4g01606 1045 SUPERFAMILY WD40 repeat-like 732 1041 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01606 Rops-Chr4 39296616 39308235 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01606 K16240 - gmx:100802144 1558.89