Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01600 ATGGCAGCCTTTGATCACTTCAGAGACATGTACGATGTTGCACTTAAACCCCGTTTGCTTGAGACCCTTATCAGAGACCATCTTCCTGATGAGAAGCACCCCTTTTCCAACCCCTCTGAGCTCTCCAAGGTTGTCTCTTTGATCAAAACACTCTCTCTCTTATCTGAGTCTGTGACAGAATCCATGGACCCCAAGTTAATTGAAGCTTGGAAATCCGCTGTTACATCATGGGTTCACCGCATTTTGACCTTACTTTCTAGCCCTATGCCAGATAAATGTTGGGCAGGAATATCTTTGCTGGGGGTTACTTGTGAAGAGTGCAGCTATGATCGTTTCCTAGAATCTTACTCTGAGTGGTTCCAAAAGTTGCTGACTTTTCTACAGTCACCGGCAGATTCTCATTTAGTGAGGGTGGCTTCTTGCACTTCAATAGCGGATCTATTTGCAAGGTTAAGTGGATTTCCAAAGTTCAAGAGAGATGGGTCTTCCTGTGCTGTGAAAGTCATTCAGCCTGTTTTGAGGATGTTACAAGATGACAACTCAGAGGCCGTATGGGAAGCTGCAGTTCATGTGTTATGTACCATGATAACTTCATTCCCATTTTCTATTCATCGTCATTATGATAGTGTTGAATCTGCTATTGCTTTTAAACTTTTGTCTGGGGGTTGCAGTCTTGATATGTTGAAGAAACTTGCGCATTGCCTTGCATTACTTCCAAAATCAAAAGGAGATGAAGAAAGCTGGTCGGCGATGATGCAAAATATTTTGGTTTCAATAAATGATCAATTAAATTTGGCATTTCAAGGTCTAGAAGAAGAAACCATGCATAATGAGTTCACTAGATTGTTGGTTCTGCCAGGAAAACATCCTCCACCACCTTTAGGAGGTAATGTATTGGCAGGAGAAGCTAGTAACAAAGCATTAAAGAGGTCTGAACAATCACTAATGTGTAATGTATCTATACTTATGTTTGGCTGTTGCACGATGCTTACAAATTCGTATCCTGTCAAGGTAAATGTACCCGTTCGTGTGTTATTGGCCCTTGTTGAGAGAATTCTGATGGTAAATGGCTCATTGCCACAAATGTCATTGCCGTTCATGACTGCCAAGCAGCAAGAGAACATTTGTTCAGAACTTCCAATTTTGCACTGGTATAGCCTGGAATTGCTTATGGCTATCATAAAGGCCACAGGCAGTCAACTATTACCACATGCTGCCTCTATTGTACGCATCATTACAAAGTATTTCAAGACATGTGCGCTGCCAGGATTAAGGATTAAGGTCTATTCAGTCACAAAGACTCTGCTCATATCCATGGGTGTTGGAATGGCTTTATGCCTCACGCAGGAAGTTATCAACAATGCTATTGCTGACTTGAGTACCATAGAGAACAAAGGCGGCACATTGAATGGTTCGAATTCAGATGCCTCTACTGGAGCACCGCTACCACCAAGTCATAGAAAAAGGAAGCACGGCAATGCAACTGGTTCTCTTCAGGAGAATGACGAAGGTGGTGGTATAGGAGTGGAAGTTCCCAAGAACCGTCCATTGACTCCAATTTCTCTGAGGATAGCTGCACTTGAGGCATTAGAGGCTCTCGTTACTGTGGCTGGTGCTTTAAGATCTGAACAGTGGAGATCAAAAGTGGATAGTCTTTTGATAGTCATAGCAATGGATTCTTTCAAGGAAGGATCATCTCGTGAAGAATTAAGCGTGTTTCAGCAAAAGGAACCTGCTGCAACTGCCACAGATTTACAGCTTGCTGCATTGCGTGCTCTTTTGGCATCTTTTCTTTCTTTTGCACGGTTGCGGCCCCCATATTTAGCTCAGGGTCTTGAACTTTTCCGTAGAGGAAAGCTACAAACTGGAACAAAACTTGCTGAGTTCTGTGCCCATGCTCTGCTAACCTTGGAACTGCTTATACATCCTAGGGCACTTCCGTTAGTAGATTATGTTTATGCAAATAACAATTCTTTTGGTGAAGCTCAGTGCAATTTCCAAGATGAATATGTTACCCGGAACAACAGTATCCCATTTGGCTTACCACAAACAGTACCTCCTGACCATGATGATGATTTGTGTGCCAAATGGATGGAAAATGGCAATGAAGCTGTTGTGTCATTGGATAACAATACAGAACACACCAAAGAGCCTTCTGAGGCTTGTAGAGATAATGACCCCAAAGAACTTTCTATGAACCTGTCTCCTGGCAACATCATCCAAGAGAGGAGTGAGATGGTATCAGAGACTGCCACTTGTGCAGATGTTGAAATGAGAATTGTTGAGGATGAAATCAATTTCAAGTCAGATCAACCTGGAGAATCTGTGGTGCAATTTCAAGAACCCATCTCTTGCACCACAACAAGCATCCCTGACACTGACACTCACGGCGCTGGAGCTACCGAGATAGCGTCTGACAGCACTATGCCTCGTAATGAAACCAGTAGTCATATGGAATCAGTCCCAGGAAGTTCAGTTAATAAAGGTTTTGAACTAGCTTCCCAGAGTAATAGTTTATTGCAAAGAACATCAGACTCTAATAAGATTCAGGAATTTGCATTTAAATTAGATTATGGAAATTCAGTGGATGATGAAGATGCTTTTCCTGATATCGTGGATGCAGACCCTGATTCTGATTCTGATTCTGAATAA 2652 0.4238 MAAFDHFRDMYDVALKPRLLETLIRDHLPDEKHPFSNPSELSKVVSLIKTLSLLSESVTESMDPKLIEAWKSAVTSWVHRILTLLSSPMPDKCWAGISLLGVTCEECSYDRFLESYSEWFQKLLTFLQSPADSHLVRVASCTSIADLFARLSGFPKFKRDGSSCAVKVIQPVLRMLQDDNSEAVWEAAVHVLCTMITSFPFSIHRHYDSVESAIAFKLLSGGCSLDMLKKLAHCLALLPKSKGDEESWSAMMQNILVSINDQLNLAFQGLEEETMHNEFTRLLVLPGKHPPPPLGGNVLAGEASNKALKRSEQSLMCNVSILMFGCCTMLTNSYPVKVNVPVRVLLALVERILMVNGSLPQMSLPFMTAKQQENICSELPILHWYSLELLMAIIKATGSQLLPHAASIVRIITKYFKTCALPGLRIKVYSVTKTLLISMGVGMALCLTQEVINNAIADLSTIENKGGTLNGSNSDASTGAPLPPSHRKRKHGNATGSLQENDEGGGIGVEVPKNRPLTPISLRIAALEALEALVTVAGALRSEQWRSKVDSLLIVIAMDSFKEGSSREELSVFQQKEPAATATDLQLAALRALLASFLSFARLRPPYLAQGLELFRRGKLQTGTKLAEFCAHALLTLELLIHPRALPLVDYVYANNNSFGEAQCNFQDEYVTRNNSIPFGLPQTVPPDHDDDLCAKWMENGNEAVVSLDNNTEHTKEPSEACRDNDPKELSMNLSPGNIIQERSEMVSETATCADVEMRIVEDEINFKSDQPGESVVQFQEPISCTTTSIPDTDTHGAGATEIASDSTMPRNETSSHMESVPGSSVNKGFELASQSNSLLQRTSDSNKIQEFAFKLDYGNSVDDEDAFPDIVDADPDSDSDSE* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01600 883 MobiDBLite consensus disorder prediction 787 829 - -
Rops4g01600 883 Pfam rRNA processing/ribosome biogenesis 23 220 IPR012583 -
Rops4g01600 883 Gene3D - 35 593 IPR011989 -
Rops4g01600 883 MobiDBLite consensus disorder prediction 713 727 - -
Rops4g01600 883 MobiDBLite consensus disorder prediction 711 732 - -
Rops4g01600 883 MobiDBLite consensus disorder prediction 468 512 - -
Rops4g01600 883 SUPERFAMILY ARM repeat 51 657 IPR016024 -
Rops4g01600 883 MobiDBLite consensus disorder prediction 859 883 - -
Rops4g01600 883 PANTHER PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1 8 880 - -
Rops4g01600 883 MobiDBLite consensus disorder prediction 863 883 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01600 - - aprc:113850109 1310.05