Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01599 ATGATTAGTTTGATTAACACATTATATTGTAACAGTAATTTCCTCACTCTTCGAGTTTCGAAAAATCACTGTCATCATCGAACAATGCCAACCGGTGAACTCCGCTACACATCGCCGCCGAAGGCGACGGTGAACTCCTCCGGTGGGTTCGAAGAAGAGGGATGGGTTTGGGCGCAGATAAAGGCGGAGGCACGCCGTGACGCCGAGTCGGAACCGGCGTTGGCGAGTTACCTTTACTCCACGATTTTGTCACATTCGTCTCTTGAACGGTCACTGGCTTTTCACCTTGGAAACAAGCTTTGTTCCTCTACCCTTCTTTCTACACTTCTATATGATCTCTTTCTCAATGCGTTTTCCTCTGACCATTCACTTCGCTCCGCCGCCGTCGCCGACCTACGAGCCGCCCGCGAGCGTGACCCTGCCTGTGTATCATACTCTCACTGTTTACTCAATTACAAGGGATTCCTTGCTTGCCAGGCGCACCGTGTGGCGCACCTCCTGTGGCAGCAGTCACGGCAGCCATTGGCACTGGCACTACAGTCTCGCATTGCCGATGTTTTTGCAGTGGATATTCACCCGGCGGCAAGGATCGGGAAGGGCATCCTGTTTGATCACGCAACAGGGGTTGTGGTGGGGGAGACAGCGGTGATTGGTAACAATGTGTCAATCCTGCACCATGTCACATTGGGTGGTACTGGGAAGGTTGGTGGTGATCGCCATCCCAAGATTGGGGATGGGGTGCTTATTGGTGCTGGTGCTACCATTTTGGGGAATGTCAAGATTGGTGAAGGTGCCAAGATTGGTGCCGGGTCGGTGGTTTTGATCGATGTGCCTCCGCAGACCACTGCTGTTGGTAACCCGGCAAGGTTGGTTGGTGGCAAGGAGAAACCATCTAAGCATGAGGATGTGCCTGGGGAGTCCATGGACCATACTTCATTCATTTCAGAGTGGTCAGATTATATCATTTGA 969 0.5212 MISLINTLYCNSNFLTLRVSKNHCHHRTMPTGELRYTSPPKATVNSSGGFEEEGWVWAQIKAEARRDAESEPALASYLYSTILSHSSLERSLAFHLGNKLCSSTLLSTLLYDLFLNAFSSDHSLRSAAVADLRAARERDPACVSYSHCLLNYKGFLACQAHRVAHLLWQQSRQPLALALQSRIADVFAVDIHPAARIGKGILFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIGDGVLIGAGATILGNVKIGEGAKIGAGSVVLIDVPPQTTAVGNPARLVGGKEKPSKHEDVPGESMDHTSFISEWSDYII* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01599 322 FunFam Serine acetyltransferase 190 315 - -
Rops4g01599 322 Pfam Bacterial transferase hexapeptide (six repeats) 240 273 IPR001451 -
Rops4g01599 322 SMART SATase_N_2_a 56 160 IPR010493 GO:0005737|GO:0006535|GO:0009001
Rops4g01599 322 MobiDBLite consensus disorder prediction 287 309 - -
Rops4g01599 322 CDD LbH_SAT 187 287 IPR045304 -
Rops4g01599 322 Gene3D Hexapeptide repeat proteins 190 311 - -
Rops4g01599 322 NCBIfam serine O-acetyltransferase 130 289 IPR005881 GO:0005737|GO:0006535|GO:0009001
Rops4g01599 322 MobiDBLite consensus disorder prediction 293 307 - -
Rops4g01599 322 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 249 277 IPR018357 GO:0016740
Rops4g01599 322 SUPERFAMILY Trimeric LpxA-like enzymes 55 292 IPR011004 -
Rops4g01599 322 Pfam Serine acetyltransferase, N-terminal 56 160 IPR010493 GO:0005737|GO:0006535|GO:0009001
Rops4g01599 322 Gene3D serine acetyltransferase, domain 1 41 189 IPR042122 -
Rops4g01599 322 Pfam Hexapeptide repeat of succinyl-transferase 207 223 IPR001451 -
Rops4g01599 322 PANTHER SERINE ACETYLTRANSFERASE 29 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01599 Rops-Chr4 39218679 39220983 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01599 56 312 Miscellaneous Gene Families AT2G17640 56.031 1.39e-91 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01599 K00640 - gmx:547632 523.087