Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01590 ATGAAGGCATCTCTACAACTCCTCTTCATAATTACTTTTCTTGGTTCATTCTTCCTTGCAAGGCCAGAAGCTGATTCGTGTACCAGTAATCTAAACCTCAAAGCTCCTATCCCTTTTGATACAACCAACCTTCACTGCCTTTCTGTATGGGGTGCTCAAGGTTTCATCCTCAGATATGTTCAGACTTCCGCAAACATTTGGAGCTTCATTCTCTCAACCCCAGACACAAATTCTTATATAGCTATGGGGTTCTCAGCCACTGGTGGCATGGTGGGTTCAAGTGCCATGGTGGGGTGGGTGGCATCCAGAGGGGCCAGCGGAGGGATAAAGCAGTATTATCTAGGTGGGTTTACACCAAATCAGGTGGTGCCTGATAAAGGCAACCTACAGGTTATTGGCAATTCAACCTTCATCACTTTACAGTTCTCTCGTCTGTACATGGTGTTCCAGCTAGAAACTACAGAACCTTTGTCCTGGTTGTTATTTGCCACTGGATCCACTGGCCTATTCCCAGCAGCACCAAGTTATGCACTAACTAAACACCTAGACAAGGTTTCCGCAAGAATAGACTACTCAAAAGCCAACCTTGGAAGTTCACAAGTGGATGGAAATTCTTCCCAAGGAGATGGAAGTAGTTCTCAATCAGACTCCTGTGATTCCAAGCTAAACCTCAGTGTTCCTCTCCTCTTTGACACAACCAATCTCAATTGCCTTCCCATTTGGAATGCTCAAGGTTACATCCTCAGATATTCTCAGACTTCTCAAAACATATGGAGCTTCATTCTCTCAGCCCCAAATGCTAATTCTTATATAGCAATGGGGTTCTCTCCCAATGGAGGCATGGTGGGTTCAAGTGCCATTGTGGGGTGGATCTCATCCAATGGAGCTAGTGGAGGCTTGAAGCAGTATAATCTAGCAGGGTATGCACCAAACCAGGTGGTGCCAGATAGAGGCAACTTAAAAGTTCTTGCCAATTCATCCTTGATCACATCACAGTCCTCACGTTTGTACATGGCCTTCCAGTTAGAAACCAATCACCCTCTGTCTCGGCTGGTTTATGCCATTGGACCCAATGGTATCTTCCCTTCGGCACCAAGTTTTGCACTAACAAAGCACCAAGACAAAGTTTCCATTACGTTGAATTATGCAACAGGTTCTAGTGCATCAGAAAGCCCAAATATGAACCTGAAAAGAAGCCATGGAGTGTTGAATATTTTAGGATGGGGCATCCTAATCATAATGGGAGCAATAGTTGCTCGCCACTTCAAACAGTGGGATCCATTTTGGTTTTATTTCCATGCTTCAGTTCAATCATTGGGTTTTGTTCTGGGAGTAATCGGTGTGATTAGTGGGCTTGTCCTAAATAATGAACTCCATATTGATGTTAGTCTTCACAAGGCTCTTGGAATCATCATTCTCATTCTCGGTTGCCTCCAGATAATGGCTTTTCTTGCTCGACCAAACAAGGAATCAAAAGCGAGAAAATATTGGAATTTTTACCATCATAACATAGGGAGAATTTTGATTATACTAGCCATAGCTAACATTTTCTACGGAATCCGTTTAGGCCATGAAGGAAGTGGATGGGTTGTAGGTTATGGAGTTGTGCTTGCTATATTACTCTGTATTGCTGTTATTTTTGAGATTGGACTGTGGAGTAGAGACTAA 1668 0.4341 MKASLQLLFIITFLGSFFLARPEADSCTSNLNLKAPIPFDTTNLHCLSVWGAQGFILRYVQTSANIWSFILSTPDTNSYIAMGFSATGGMVGSSAMVGWVASRGASGGIKQYYLGGFTPNQVVPDKGNLQVIGNSTFITLQFSRLYMVFQLETTEPLSWLLFATGSTGLFPAAPSYALTKHLDKVSARIDYSKANLGSSQVDGNSSQGDGSSSQSDSCDSKLNLSVPLLFDTTNLNCLPIWNAQGYILRYSQTSQNIWSFILSAPNANSYIAMGFSPNGGMVGSSAIVGWISSNGASGGLKQYNLAGYAPNQVVPDRGNLKVLANSSLITSQSSRLYMAFQLETNHPLSRLVYAIGPNGIFPSAPSFALTKHQDKVSITLNYATGSSASESPNMNLKRSHGVLNILGWGILIIMGAIVARHFKQWDPFWFYFHASVQSLGFVLGVIGVISGLVLNNELHIDVSLHKALGIIILILGCLQIMAFLARPNKESKARKYWNFYHHNIGRILIILAIANIFYGIRLGHEGSGWVVGYGVVLAILLCIAVIFEIGLWSRD* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01590 555 ProSiteProfiles Cytochrome b561 domain profile. 363 555 IPR006593 -
Rops4g01590 555 ProSiteProfiles DOMON domain profile. 244 356 IPR005018 -
Rops4g01590 555 Pfam Eukaryotic cytochrome b561 400 520 IPR006593 -
Rops4g01590 555 ProSiteProfiles DOMON domain profile. 53 165 IPR005018 -
Rops4g01590 555 CDD DOMON_DOH 244 377 IPR045266 -
Rops4g01590 555 SMART DOMON_3 79 165 IPR005018 -
Rops4g01590 555 SMART DOMON_3 270 356 IPR005018 -
Rops4g01590 555 MobiDBLite consensus disorder prediction 197 216 - -
Rops4g01590 555 CDD DOMON_DOH 45 146 IPR045266 -
Rops4g01590 555 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 8 194 - -
Rops4g01590 555 Gene3D - 375 551 - -
Rops4g01590 555 CDD Cyt_b561_FRRS1_like 377 549 - -
Rops4g01590 555 SMART 561_7 399 520 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01590 Rops-Chr4 39110985 39117927 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01590 - - gmx:100804791 887.871