Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01581 ATGTCGTGGTTTCCGCCCCTCTCCAGCTGGGGAGGTGCTGCGATGATGACGTGGCTCAACAACAACACCACCCTTCGAAAGCAAAATTTCCTCCACTGGAAAAACGAAGATGTTCAGGGCATGATGGGTGCATCATCAGAGAAAAGCACTGATCGAAACTGTGCTAAAAGTAATGTCGAATCGAATAACTTAACAGATTATAAAGGAGCAATCTTCAACTTTGGGGATTCAAATTCGGATACGGGTGGGTTTGCTGCAGCCTTTCCTGCACAGCCTGGTCCCTATGGAATGACTTATTTCAAGAAACCAGTGGGACGGGCTTCTGATGGAAGGCTCATTGTGGATTTTCTGGCTCAGGCTCTTGGATTGCCATTTTTGAGCCCATATCTGCAGTCAATTGGATCAAACTACACACATGGGGCTAACTTTGCATCTTCAGCCTCCACTGTGCTTCTCCCCACTACTTCTTTCTTTGTCAGTGGGCTCAGCCCATTTTCCCTTTCCATACAACTAAGGCAAATGGAGCAATTCAAAGCCATAGTTGATGAATTTCATCAAAGAGGCACAAGGGGCAACATTCCTTCACCAGATATCTTTGGAAAGTCCATTTACACATTCTATATTGGTCAAAATGACTTCACTTCCAAAATAGCAGCCACTGGTAGTATTAATGGAGTGAGGGATAGCCTTCCTCAAATCATCTTACAGATTGATTCTGCCATCAAGGAGCTATATGCACAAGGGGCCCGTACATTTATGGTATTCAATCTTGGTCCGGTGGGATGCTATCCTGGATTTTTGGTTGAGCTTCCTCATGCTAGCTCTGACTTTGATGAATTTGGTTGCATGGTTTCTTACAACAATGCTGTGGCTGATTATAACAAACTGTTGAAGGAGACATTGAGCCAAAGTCGAAGAAGTTTATCAGATGCTTCCCTGATTTACGTGGACACTCACTCTGCTATATTGGAGCTCTTCCACCATTCCACATCTTATGGACTAAAGTATAGTACCAAAGCATGCTGTGGGCATGGAGGAGGAGATTACAACTTTGACCCTAAAGCTTTGTGTGGCAATATGCTTGCAAGTGCTTGTGATGACCCCCAAAACTATGTGAGCTGGGATGGCATCCATTTCACAGAAGCTGCAAACAAGATCATAGCCAAGGCCATTATCAATGGCTTTCTTTTTGATCCCCCTTTCCCTCTTCAGAAACGCTGTGATCTTCAACCTATTGATTGA 1242 0.4428 MSWFPPLSSWGGAAMMTWLNNNTTLRKQNFLHWKNEDVQGMMGASSEKSTDRNCAKSNVESNNLTDYKGAIFNFGDSNSDTGGFAAAFPAQPGPYGMTYFKKPVGRASDGRLIVDFLAQALGLPFLSPYLQSIGSNYTHGANFASSASTVLLPTTSFFVSGLSPFSLSIQLRQMEQFKAIVDEFHQRGTRGNIPSPDIFGKSIYTFYIGQNDFTSKIAATGSINGVRDSLPQIILQIDSAIKELYAQGARTFMVFNLGPVGCYPGFLVELPHASSDFDEFGCMVSYNNAVADYNKLLKETLSQSRRSLSDASLIYVDTHSAILELFHHSTSYGLKYSTKACCGHGGGDYNFDPKALCGNMLASACDDPQNYVSWDGIHFTEAANKIIAKAIINGFLFDPPFPLQKRCDLQPID* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01581 413 SUPERFAMILY SGNH hydrolase 71 395 - -
Rops4g01581 413 Pfam GDSL-like Lipase/Acylhydrolase 71 391 IPR001087 GO:0016788
Rops4g01581 413 CDD SGNH_plant_lipase_like 70 394 IPR035669 -
Rops4g01581 413 Gene3D SGNH hydrolase 66 395 IPR036514 -
Rops4g01581 413 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 70 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01581 Rops-Chr4 39034418 39043699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01581 70 402 Acyl Lipid Metabolism Gene Families AT4G10950 28.779 2.57e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01581 - - aprc:113850566 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01581 4 39034418 39043699 Rops4g01581 4 39034418 39043699 ECH