Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01579 ATGGCAGTGGCAGTGGCAGCTTCCACGGTGCTACTCCCTTCTAGGATTCCGACCACCACCAATGTTACCCGCTGTTCTGCTTTGCCTTGTCTCCCTCCTCGCTTCTCCACCAGCACCCCTTTGTTCTCACCTTCCCTCAAACACTTTTCAGAGTCCCGAAAATCTTCTCTGCTCCAGACCAGAGCTTCTTCAGAGGATACATCTTCAGTAGATGCTAATGAGTTGGTCACAGATTTGAAGCAAAAGTGGGATGCGGTTGAAAATAAGTCAACAGTACTTCTTTATGGTGGTGGGGCTATAGTTGCTGTTTGGCTATCTTCAATTCTTGTGGGTGCCATCAACTCAGTTCCCTTGCTTCCAAAGATTATGGAGTTGGTAGGGCTAGGGTACACTGGATGGTTTGTCTACCGATACCTTCTGTTTAAGTCTAGCAGGAAGGAGCTAGCTGAGGACATTGAGACACTGAAGAAGAAAATTGCTGGAACTGAATAG 492 0.4736 MAVAVAASTVLLPSRIPTTTNVTRCSALPCLPPRFSTSTPLFSPSLKHFSESRKSSLLQTRASSEDTSSVDANELVTDLKQKWDAVENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELAEDIETLKKKIAGTE* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01579 163 Coils Coil 145 163 - -
Rops4g01579 163 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 78 161 IPR025564 -
Rops4g01579 163 PANTHER - 12 162 IPR033344 GO:0009579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01579 Rops-Chr4 39025250 39028047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01579 - - gmx:100305578 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01579 4 39025250 39028047 Rops4g01579 4 39025250 39028047 ECH