Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01576 ATGAAGGATTCGAGTTCGGATCTTTTTGACCCGGTTATGGTTATGGAATCCGAATGGTCTCACGGTGGTTCTAATTCCGAAGCTGATTTCGGGTTCGCTTTCAATGACAGTAATTTCTCTGACCGGATTCTCGAAATCGAGATCATGGACGACCCGGTTGATACCCGAGCTGATTCCGAAGGTTGTACCACCATCGCCGATTGGGCTCGCCACCGCAAAAGGAGGCGCGGAGATATCAAGAAGGAAAACGTTGTGGATGTTACTTCATTGCCCGATGAGCAAGTTTTGAACGTGAGCCAACCTGATATGGATGATGGGGTGGCCTGTGAAAATCAAGATGAAGAGGCTGTTGCAATGGTTGAGGAATCCTCTTCAGGTGATGAAGCTTCAAATAGCAATGATTCAAACTGGAGCATGGATACCTCTGCTGCTGCAGTTGTTAGAGTTAAAACACTACATATCAGTTCTGCTGTCCTGGCTGTTAAAAGTCCTTTCTTCTATAAGCTTTTCTCAAATGGTATGAAGGAGTCAAAACAGAGAGATGTCACCCTCAGAATTAATGCCTCTGAAGAAGCTGCTCTCATGGAGCTACTGTATTTTATGTACAGTGGTACCTTGAAGAGTGATACAGCACCTGCTTTGCTGGATGTGTTGATGGCTGCTGACAAATTTGAAGTTGCTTCATGCATGAGATACTGTAGCCAGTTATTGGTGAATATGCCCATGTCACCTGAATCTGCCTTGCTTTACCTGGAGCTTCCTTCTAGTGTCTTAATGGCTGATGCTGTTCAACCATTGACTGATGCAGCAAAGCTGTATCTCGCTGGTCGATACAAGGATATAACCAAGTTCCAGGAAGAGGTTATGGCCTTGCCCCTAGCTGGAGTAGAGGCAGTATTGTCCAATGATGATCTCCAGGTTGCATCAGAAGATGCTGTATATGACTTTATGTTGAAGTGGGCTAGAAAAAAATACAGCAATCTGGAAGAAAGGCGAGAAGTCCTGGGTGCACGGCTTGCACGTGTACTTCGCTTCCCTTACATGACCTGCCGAAAGCTTAAGAAGGTCTTAATCTGTCATGACTTTGACCACGAGGTCGCATCCAAGCTTGTACTTGAGGCCCTATTTTTCAAGGCTGAGGCTCCACATCGCCAACGATCACTGGCAGCAGAAGAGTCTGCTTCATTGAACCGTCGTTTTGTGGAGAGGGCATACAAGTATCGCCCCGTTAAAGTGATAGAATTTGAACTTCCCCGGCAGCAGTGTGTGGTGTACTTGGATCTGAAGAGGGAGGAGTGTGCCAATTTGTTCCCATCTGGCCGGGTTTATTCTCAAGCATTCCACTTGGGTGGTCAAGGGTTTTTTCTATCAGCGCATTGCAACATGGATCAACAGAGCTCTTTCCATTGCTTTGGGCTGTTTTTGGGAATGCAGGAAAAGGGCTCAGTGAGCTTTGCTGTGGACTATGAATTTGCTGCAAGGTCTAGGCCAACGGAGGAGTTTGTTAGCAAGTACAAAGGCAATTACACATTCACAGGGGGAAAGGCCGTTGGCTATAGAAACTTGTTTGCAATTCCATGGAAATCGTTCATGGCTGAGGATAGTCTTTTCTTCATTAATGGTGTTCTCCACCTGAGAGCCGAGCTCACCATCAGACTTTGA 1662 0.4621 MKDSSSDLFDPVMVMESEWSHGGSNSEADFGFAFNDSNFSDRILEIEIMDDPVDTRADSEGCTTIADWARHRKRRRGDIKKENVVDVTSLPDEQVLNVSQPDMDDGVACENQDEEAVAMVEESSSGDEASNSNDSNWSMDTSAAAVVRVKTLHISSAVLAVKSPFFYKLFSNGMKESKQRDVTLRINASEEAALMELLYFMYSGTLKSDTAPALLDVLMAADKFEVASCMRYCSQLLVNMPMSPESALLYLELPSSVLMADAVQPLTDAAKLYLAGRYKDITKFQEEVMALPLAGVEAVLSNDDLQVASEDAVYDFMLKWARKKYSNLEERREVLGARLARVLRFPYMTCRKLKKVLICHDFDHEVASKLVLEALFFKAEAPHRQRSLAAEESASLNRRFVERAYKYRPVKVIEFELPRQQCVVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWKSFMAEDSLFFINGVLHLRAELTIRL* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01576 553 FunFam BTB/POZ domain-containing protein POB1 275 379 - -
Rops4g01576 553 Gene3D Potassium Channel Kv1.1; Chain A 116 273 IPR011333 -
Rops4g01576 553 Gene3D - 274 379 - -
Rops4g01576 553 ProSiteProfiles BTB domain profile. 141 210 IPR000210 GO:0005515
Rops4g01576 553 SUPERFAMILY TRAF domain-like 440 551 - -
Rops4g01576 553 SMART BACK_2 256 358 IPR011705 -
Rops4g01576 553 PANTHER OS02G0260700 PROTEIN 15 552 IPR045890 -
Rops4g01576 553 SUPERFAMILY POZ domain 150 238 IPR011333 -
Rops4g01576 553 Pfam BTB And C-terminal Kelch 265 356 IPR011705 -
Rops4g01576 553 CDD BTB_POZ_ZBTB_KLHL-like 146 224 - -
Rops4g01576 553 SMART BTB_4 114 241 IPR000210 GO:0005515
Rops4g01576 553 Pfam BTB/POZ domain 147 239 IPR000210 GO:0005515
Rops4g01576 553 MobiDBLite consensus disorder prediction 117 137 - -
Rops4g01576 553 FunFam BTB/POZ domain-containing protein POB1 134 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01576 Rops-Chr4 39012264 39015669 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01576 - - gmx:100776595 942.569