Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01573 ATGCCTGCATACAGAAACATGGACTCATACCCATATCAAAGAAACCAAATGCCACTTCCTCATTTTTATCATCCTGGTATTGAGGCTGTACCCCCTCAAATAAGGGTGGATCCATCCAAACCACCCTTTTCTTATGAACAATTTTGGCCTTGTGCTGGCAATTATGGGCACCCTATTCCTTCACATTTCTGCTGTGGCCACAACAATTTCCCTGGTTATTATAACTACAGGCCTTCTTATCCTCATGCTCCTGCTCCATCACCAATACATTGTTCTGGTGGTTGTCCTGCTTATGGTGAACCATTCTTTGTTCCTTATTCCCCACAACCACATTATATTATGGAGCTGCCTAGATATGAACATGATAAATATATGCCCAGAGACCATCATTGTTGTGGGTGTCCTAATCATCCATGCAACCAAAAGGAAGGTAATAGTGTGAAGATTGAAGAGCAGGAACCTTGTATTGGAAAGAAAGTGAATGATGCTTTGGTCCCAATTCAGTTGAGGAATTATCCATATCCCATCGTTTGGATTCCACCTGAGTATGCTAGTAACAGACAGCCAATAAATCATACTACAGCCGAGGAGGGTGAGCAAAACAAGATATCCCATGATAGAAAGCCTCCTGGCCCTGGGAATTTTAATGCTGATGTGCAGCAAGGACAGGAGCCAAGAGTATGGAATGGATGGTTACCATTTGATATGAAGGGCACCCCAAATATGGTTCATGATGGAGATGGAACAAGAAGCCAGAAATTGGAGACTGATGACAACAAAAGGGAATCTGAAGATGGAAGAATGAACCAGAAACAGCAAAGTGATTACAAGAGATCTGAATTCCCATTCCCTATCATCTGGTTGCCTTACTACAATAAGCAGGAGGAAGGTGGAAGGATAAACAATCAGGAGAACAACACTTTTACTCCAAAATGCATTGAGGAGGTACCTCATACATTTAAATCTGTTCCAGTAAAGTCTCATGTTGACGAAGGTGTTACAAACAAGAGCAGATCAAATGAAGTTGAATCCACAAATACAAGTGCTCCAGATGTTATCAAGAAAGTGACTAATGAAAGAAGCATCCCTGTGAAGCAGATGGAATTGCATCAAGGAACAAATGACTCGCAGGGAAGTGACAAGAGAGAATTGAATATTCCTGTGAGTCAAATGGAAGAAAATGAGACAAAGAAAGACTCCGACACCAGTGGCAATAGACGATCCACATCTCCAAAAGGATCCAAGTTACCTCCTGTTTGTCTGAGAGTTGATCCACTACCAAGGAAGAAAAATGGAAAGGGAAGTTCAAGGTCCCCAAGTCCACCTGCCTCAAAAGAACATTCCCAAGCAACAGCGGGTGAAACATCCAAGACTCCTACGCGTGACATAAATGACAAGGCTCAGCCAAACTCAAATGTTGAGAATGCTCCGAGTACCAGTGAGAAAGTTAAACCAAAGGAGAGAACCATTCAGGTATATGATGCGAATGACAAGGCTCAGCCAAATTCAAATCTTCAGAATGCTCCAAACACCACTGAGAAAGGTAAACCAGAGGAGAGAACCATTCAGGTGTATGACATGAATGACAAGGCGCAGCCAAATTCAGATCTTCAGAATGCTCCAAACACCAGTGAGAAAGTTAAACCAAAGGAGAGAACCATTCAGCTATCTGAAGATAAGACTCGTGAAAACAAGGGTGCTGAAGATAAAAAGGCAGAGGAAGGGGCGGAAGATGAGATGGAAGAAAAAGCTACTGAACTAAAGGAAGTAAAGGATTCAAGCACACCAACTGATGAAGGTCAAAAGGAGAGAAGAGTTTTATCGGATGCAGATGCTGCTGTTTTGATACAAGCTGCTTATCGTGGTTATCAAGTAAGAAAATGGGAACCATTGAAGAAATTGAGGCAGATAGCTGAAGTCCGTAAGGAGGTGACTGATGTTAGAGGCCAAATTCAAGCTTTTGAGGGCTCTTCTGATCTTCAAAATGATGACAAGCAAAAAATTGCAATTGGAGAGACCATAATGAGACTCCTGCTGAAGTTGGATACTATACAGGGTTTGCATCCAAGTTTCAGGGAGATCAGAAAATCCCTGGCGAGAGAGCTTGTAACCTTGCAAGAAAGGCTCGATTCTATAATGGCTAAGAAACCTCAGCAGCAGATGCCTGTTGAAGTCACACCACTGAACAAGCAGAATGGAGAATATCAGCAAGAACAAGAAGAAGAAAAAGTTGCAGCACCGGGAGATTCATCTGAAGGCATCAGGGAAGGAAGTCATGACACCTTGGAAAAATGTCAGGATCAGTTTTGCATGAAGGATGACATCAACAATCTTAGTCCCACTGATGGTGGAAGTGAATCTCAGTCACCAGTTGATCCCACCTCACATGAGGGAACAGAGCCTGTTGTATTACCAAACAGCTTAGTTAATGAGGAAATTAGCCCAGTGGTTGCAGTTGATGCATTGGATTCAACAAGTGGTCTTTCTGAGACTGACAAAATGGCTGTGGAACATGAAGTGAAATCAGAGGTGAATAACATTTCCATGGAGGTTGATAAATTGGACATGACTGCTTTGAAAGAATTGCCTGTTGGAGTAGTTGATGAAGACATCGATGACATTAGTTCTAGGAAGGATAATCCAGAGATTCATTTGATGAAGGAGCTGCCAGTGGGAGTGCTTGATGAGGATATGGTCACTTCTGAATTTGGAAATCATGACGAAACTAATATTTCTAAAGATGAATTACAAGCTGAAAATGAGGAATATGCTGAGGAGCTCGCTGTGGGACTGCTTAATGAGGATACAGCAAAATCTGAATTTGAGAAGCATGATGAAAGTAAGACTTATAAAGCTGAAGAAGAAGAATGTAATGCAGATGAAAGACCAAGTTCTTCCACAGATGACACTGCAAAAGAAACTCAAATGGAGCAGCCTGAAGAGCAGGAAGAGGTGCAGTCTAGTGGGGAATCAGATGGCTGGGTAAAGATTGAGTTTCAGAAAGAAGATGAACTCAAAGGGGATGCACCACTGGAAATAGAGGAGTCACGAGAGGAAAATAGAAGTGATACTAAGTTGCCACCATCTTTGACAACACAAGTTAATGATCACAATCTAGGGAATGAAGAAGTATGCTTGGAAGCAAATGATGTAACTAACACACTGCCAGAACCAATGGAGTTTCTGCCTACCAATGATTTACAAAAGGAAGAGAAACCACAAGAGAAGTTAGCACAGTGGGAAACACAAGTTGAAGATCAAGAAATGGTTGCTGAACAGACAGACAGAGCTGATGATGAAGAAACAGAAAATTTGGTCAAGGAGGAAAATGAACTATCTGCAGCATCACCAGCAATAAAAGAATTGCCTGTTGCTGAGCATGATAGAGGGTTAAATGGGGATGCAAAATTAGTGGAGGAGAATGAGAAGTTAAGGAAGGTGATGAAGGAGTTGCTGGAAGCTGGAAATGAGCAGTTAAGTGTAATATCAGATTTGATGGGCAGAGTGAAGGACTTGGAGAAGAAATTGGCAAGGAACAGGAGTAAGAGAGTGAGGACAAAGCGATATAGACCAGCAACTTCCAAGATGTCTAGCATGAAATCATCCAAATAA 3612 0.4192 MPAYRNMDSYPYQRNQMPLPHFYHPGIEAVPPQIRVDPSKPPFSYEQFWPCAGNYGHPIPSHFCCGHNNFPGYYNYRPSYPHAPAPSPIHCSGGCPAYGEPFFVPYSPQPHYIMELPRYEHDKYMPRDHHCCGCPNHPCNQKEGNSVKIEEQEPCIGKKVNDALVPIQLRNYPYPIVWIPPEYASNRQPINHTTAEEGEQNKISHDRKPPGPGNFNADVQQGQEPRVWNGWLPFDMKGTPNMVHDGDGTRSQKLETDDNKRESEDGRMNQKQQSDYKRSEFPFPIIWLPYYNKQEEGGRINNQENNTFTPKCIEEVPHTFKSVPVKSHVDEGVTNKSRSNEVESTNTSAPDVIKKVTNERSIPVKQMELHQGTNDSQGSDKRELNIPVSQMEENETKKDSDTSGNRRSTSPKGSKLPPVCLRVDPLPRKKNGKGSSRSPSPPASKEHSQATAGETSKTPTRDINDKAQPNSNVENAPSTSEKVKPKERTIQVYDANDKAQPNSNLQNAPNTTEKGKPEERTIQVYDMNDKAQPNSDLQNAPNTSEKVKPKERTIQLSEDKTRENKGAEDKKAEEGAEDEMEEKATELKEVKDSSTPTDEGQKERRVLSDADAAVLIQAAYRGYQVRKWEPLKKLRQIAEVRKEVTDVRGQIQAFEGSSDLQNDDKQKIAIGETIMRLLLKLDTIQGLHPSFREIRKSLARELVTLQERLDSIMAKKPQQQMPVEVTPLNKQNGEYQQEQEEEKVAAPGDSSEGIREGSHDTLEKCQDQFCMKDDINNLSPTDGGSESQSPVDPTSHEGTEPVVLPNSLVNEEISPVVAVDALDSTSGLSETDKMAVEHEVKSEVNNISMEVDKLDMTALKELPVGVVDEDIDDISSRKDNPEIHLMKELPVGVLDEDMVTSEFGNHDETNISKDELQAENEEYAEELAVGLLNEDTAKSEFEKHDESKTYKAEEEECNADERPSSSTDDTAKETQMEQPEEQEEVQSSGESDGWVKIEFQKEDELKGDAPLEIEESREENRSDTKLPPSLTTQVNDHNLGNEEVCLEANDVTNTLPEPMEFLPTNDLQKEEKPQEKLAQWETQVEDQEMVAEQTDRADDEETENLVKEENELSAASPAIKELPVAEHDRGLNGDAKLVEENEKLRKVMKELLEAGNEQLSVISDLMGRVKDLEKKLARNRSKRVRTKRYRPATSKMSSMKSSK* 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01573 1203 SMART BAG_1 636 713 IPR003103 GO:0051087
Rops4g01573 1203 Coils Coil 906 933 - -
Rops4g01573 1203 ProSiteProfiles IQ motif profile. 609 638 IPR000048 GO:0005515
Rops4g01573 1203 MobiDBLite consensus disorder prediction 238 277 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 1092 1106 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 936 979 - -
Rops4g01573 1203 Pfam IQ calmodulin-binding motif 611 628 IPR000048 GO:0005515
Rops4g01573 1203 MobiDBLite consensus disorder prediction 735 759 - -
Rops4g01573 1203 FunFam BAG family molecular chaperone regulator 6 626 717 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 903 918 - -
Rops4g01573 1203 Coils Coil 570 593 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 773 801 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 527 544 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 194 219 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 495 512 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 1064 1082 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 903 1039 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 367 384 - -
Rops4g01573 1203 ProSiteProfiles BAG domain profile. 636 713 IPR003103 GO:0051087
Rops4g01573 1203 MobiDBLite consensus disorder prediction 773 795 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 338 354 - -
Rops4g01573 1203 Pfam BAG domain 637 711 IPR003103 GO:0051087
Rops4g01573 1203 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 132 449 IPR040400 -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 995 1024 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 1173 1203 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 1025 1039 - -
Rops4g01573 1203 Coils Coil 1162 1182 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 248 274 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 545 605 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 732 759 - -
Rops4g01573 1203 Gene3D - 598 626 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 433 479 - -
Rops4g01573 1203 Coils Coil 1134 1157 - -
Rops4g01573 1203 Gene3D BAG domain 627 716 IPR036533 GO:0051087
Rops4g01573 1203 Coils Coil 695 715 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 386 405 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 324 605 - -
Rops4g01573 1203 MobiDBLite consensus disorder prediction 1054 1127 - -
Rops4g01573 1203 SUPERFAMILY BAG domain 628 712 IPR036533 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01573 Rops-Chr4 38866593 38870633 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01573 - - gmx:102668563 1268.06