Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01566 ATGGGTTCTTTGGAATCTGGGATCCCATTGAAGAAAGGGAGCTTGTTTGGTCCTCAGTTCAGCAGAAAGGAAAGGCACCCTTTTTCTCAGAGATTCAGATCGAGCTTCTCACGTTTGCTATTCACGAAACTAGATTATGTTCAATGGATTTGCACGGTGGTTGTATTTTTTGGCTTGGTGGTTGTGTTCCAAATGTTCCTTCCAGGTTCTGTTGTGGAAAACTCAGAGGAATCGTTGAGAGGAGCTGTGAAGATGCATTCTGGGAACTCGTGGCATTATATTGACAAAGATAAGTATGTGTTGGATATTGGGGAGGAAGCTGTTCTTTTGCCTAAGATTACGGAGAAATTCAAGAGAGGTGATGGTAGGGATGTGAATCTGTTCAACCAATCGGTGCAACATTTTGGGTATAGAAAGCCTCAGTTGGCACTGGTATTTGGAGAACTATTGGTTGATTCACAACAATTGCTGATGGCAACAGTTGCATCTGCTTTTTTAGAGATTGGCTACGGAATTCAGGTCTTTTCACTTGAAGATGGACCAGGGCATAATGTGTGGAGAAATTTAAGAGTTCCCATCACTGTCATTCGAACTTGTGACAAGCCAAACAGCACTGTAGACTGGCTAAACTATGATGGTATAATTGTGAGCTCTCTTGAAGCCAGAGGTGCCTTTTCTTGTTTTTTGCAGGAACCTTTCAAGTCTATACCGCTTATATGGATCATTCATGAAAATGCCCTTGGTTATCGTTCAAGACAATATACTACTAGTGGGCAGATTGAATTTTTGAATGATTGGAGAAGAGCTTTTGATCGTTCAACAGTTGTTGTCTTCCCAAACTATGCCTTGCCGATGATATACTCTACATTTGATGCTGGAAATTTTCATGTCATTCCCGGTTCCCCTGCTGAAGCATTAGAAGCAGATGCATTTATGGCCTTACAGAAAGATAATTTGCGCATCAGTATGGGATATGGCCCAGAAGATGTGATTATTGCAATTGTGGGCAGTCAATTTTTGTACAAGGGCATGTGGTTGGGGCATGCTATGGTTTTGCGGGCTTTGTCACCACTTCTGGCTGACTTCTCCATAAGCAAAGATAATTCCAGTGCACAACTACGAATCGTTGTTCATAGTGGGGAATTGACAAATAACTACAGTGTGGCTCTTGAGACCATGGCACGTAGCTTGAAATATCCAAAGGGCATTATAGAGCATATAGCTGGAGATTTGAATACAGATTCTGTTCTTGGCACGGCAGATGTTGTGATATATGGATCGTTCCTTGAGGAGCAGTCTTTTCCAGAGATTTTGATGAAAGCCATGTGCTTTGAGAAACCGATTATTGCTCCTGATATTTCCATGATCAGAAAATATGTTGACCACAGGGTGAATGGCTATCTTTTTCCTAAGGATAATATTAGAGTTCTTAGAGAAATTATGTTAGAGGTGATCTCGAAGGGGAAAATATCACCTCTGGCTCGTAACATTGCCTCAATAGGGAGAAGAGCTGCTAAGAACCTTATGGTTTCAGAAGCAATTGATGGATATGCAAATTTACTTCAGAATATTCTCCGGCTTCCATCAGAGGTTGCTCCTCCTAAGGCTGTTTCAGAAATATCCCCCCATGTTAAAGAACAGTGGCAGTGGCATTTGTTTGAGGCAGTTCCAAGTTCAACATATCAAAATAGGACATTAAGAAGCAACACATTTTTAGATAAATATGAGGACCGATGGAATCATTCTCAAAAAAATAGATTCACTACTTCTGTTGCTGCTAGTAATGATTCATTTGTATATAGCATATGGGAAGAAGAAAAGTATATTCAGATGGCTATTACAAAAAAAAGGAAGGAGGATGAAGAGTTAAAGGATAGAACAGAGCAATCACATGGAACATGGGAGGAAGTATATCGAAATGCTAAGAAAGCTGATAGGTTAAAGAATGATTTGCATGAAAGGGATGAAGGAGAGCTTGAGCGGACAGGACAACCACTGTGCATTTATGAACCGTACTTTGGGGAAGGGTCCTGGCCTTTTCTACATCAAAGGTCTCTTTATCGTGGAGTTGCCCTATCCAGTAAAGGTCGAAGGCCTGGGAGAGATGATTTTGATGCACCTTCTCGTCTTCCACTGCTTAATAATGCTTACTATCGAGATGTGCTTGGCGAATATGGATCCTTCTTTGGCATTGCAAACAGGATTGATCGTTTACACAAAAATGCTTGGATTGGATTTCAGTCTTGGAGAGCAACAGCAAGGAAGGCATCTTTGTCCAGAACTGCTGAAAATGCATTATTAGATGCTATCCAATCCAAAAGATATGGGGATGCACTATATTTCTGGGTGCGCATGGATATGGATCCGCGAAACCCTTTAAAGAAGGACTTTTGGTCATTTTGTGATGCCATTAATGCAGGAGGTTGCAAGTTTACTTTCTCAGAAGCCATGAGGAGAATGTATGGATTAAAAAATGATACAGATTCTTTGCCACCTATGCCTGTAGATGGTGACACTTGGTCTGTCACGCTGAGTTGGGCTCTGCCTACAAGATCCTTTTTAGAGTTTGTGATGTTCTCAAGAATGTTTGTAGATGCATTGGATGCGCAGATGTATGAAGAACACCATTCAACTGGACACTGTTCTTTGAGTTTGTCAAAAGATAAGCATTGCTATGCAAGGGTTCTTGAGCTTCTTGTGAATGTGTGGGCATACCACAGTGCAAGGAGGATGGTGTTTGTGAACCCTGAGACTGGTGTAATGCAGGAACAACACAAATTCAAGAGCCGTAGAGGTCAAATGTGGATCAAATGGTTCTCATACAGCACACTTAAGAGCATGGATGAGGACTTAGCAGAGTTATCAGATTCTGAGGATCCTAGCAGGCATTGGTTATGGCCATCAACAGGTGAAGTCTTTTGGCAAGGTGTATATGAGAGAGAGAGAAATCTAAGGCACAAGGAGAAGGAAAAGAGGAAGCAAAAAAGTTTAGAGAAACTAAATAGAATGAGGAAACGTCATCGTCAACAAGTCATAGGGAAATATGTTAAGCCCCCACCTGAAGAAGAAAGCTCTAACTCATCTTCACTTGCAGTAAATGCATCATGA 3108 0.4128 MGSLESGIPLKKGSLFGPQFSRKERHPFSQRFRSSFSRLLFTKLDYVQWICTVVVFFGLVVVFQMFLPGSVVENSEESLRGAVKMHSGNSWHYIDKDKYVLDIGEEAVLLPKITEKFKRGDGRDVNLFNQSVQHFGYRKPQLALVFGELLVDSQQLLMATVASAFLEIGYGIQVFSLEDGPGHNVWRNLRVPITVIRTCDKPNSTVDWLNYDGIIVSSLEARGAFSCFLQEPFKSIPLIWIIHENALGYRSRQYTTSGQIEFLNDWRRAFDRSTVVVFPNYALPMIYSTFDAGNFHVIPGSPAEALEADAFMALQKDNLRISMGYGPEDVIIAIVGSQFLYKGMWLGHAMVLRALSPLLADFSISKDNSSAQLRIVVHSGELTNNYSVALETMARSLKYPKGIIEHIAGDLNTDSVLGTADVVIYGSFLEEQSFPEILMKAMCFEKPIIAPDISMIRKYVDHRVNGYLFPKDNIRVLREIMLEVISKGKISPLARNIASIGRRAAKNLMVSEAIDGYANLLQNILRLPSEVAPPKAVSEISPHVKEQWQWHLFEAVPSSTYQNRTLRSNTFLDKYEDRWNHSQKNRFTTSVAASNDSFVYSIWEEEKYIQMAITKKRKEDEELKDRTEQSHGTWEEVYRNAKKADRLKNDLHERDEGELERTGQPLCIYEPYFGEGSWPFLHQRSLYRGVALSSKGRRPGRDDFDAPSRLPLLNNAYYRDVLGEYGSFFGIANRIDRLHKNAWIGFQSWRATARKASLSRTAENALLDAIQSKRYGDALYFWVRMDMDPRNPLKKDFWSFCDAINAGGCKFTFSEAMRRMYGLKNDTDSLPPMPVDGDTWSVTLSWALPTRSFLEFVMFSRMFVDALDAQMYEEHHSTGHCSLSLSKDKHCYARVLELLVNVWAYHSARRMVFVNPETGVMQEQHKFKSRRGQMWIKWFSYSTLKSMDEDLAELSDSEDPSRHWLWPSTGEVFWQGVYERERNLRHKEKEKRKQKSLEKLNRMRKRHRQQVIGKYVKPPPEEESSNSSSLAVNAS* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01566 1035 Coils Coil 986 1010 - -
Rops4g01566 1035 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 159 525 - -
Rops4g01566 1035 PANTHER GLYCOSYL TRANSFERASE FAMILY 1 PROTEIN 1 1027 - -
Rops4g01566 1035 MobiDBLite consensus disorder prediction 998 1012 - -
Rops4g01566 1035 Gene3D Glycogen Phosphorylase B; 307 507 - -
Rops4g01566 1035 CDD GT4_PimA-like 158 522 - -
Rops4g01566 1035 MobiDBLite consensus disorder prediction 986 1035 - -
Rops4g01566 1035 MobiDBLite consensus disorder prediction 1021 1035 - -
Rops4g01566 1035 Pfam Glycosyl transferases group 1 380 500 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01566 Rops-Chr4 38750884 38759571 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01566 - - gmx:100807455 1743.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01566 4 38750884 38759571 Rops4g01566 4 38750884 38759571 ECH