Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01564 ATGGCCCTTCTAGTCCCTTCCCCGGAAACGTACGTTGCCCCTCAAATTGCCTTGAACCCTAACCCTAATCTGAGCAAATTCCACAGCTTCAAACCCTACACAAAAGGCAAGGCAATTGGATCAAAGCGTGGGATGAAAATTTCTTGCAAAGTGAAAGATTTTGCGGTTTTGGATTTGAGTTTGGATCAGAACGTGAAATCGTACGGTCAATTCTCGGTTCCAGTGAAGCAAGGTTCGAGGCAGAGCAAAGAGGAAGAGGAAGAAAAGCAGAATTTCTATGTGAATTTGGGATATGCTATAAGAACTTTGAGGGAGGAGTTCCCTGATCTCTTCTACAGGGAACTTAGCTTTGATATTTACAGGGATGATATTGTATTCAAGGATCCTCTGAATACATTCATCGGTGTCAAGAATTACAAATCAATCTTCTGGGCACTCCGATTTCATGGCAGGATGCTTTTCAAAGCTTTGTGGGTAGAATTAAGCAGTGTGTGGCAGCCTGTTGAGAACGTCATCATGGTTCGCTGGACTGTTCATGGGATTCCACGAGTTCCATGGGAAAGTCGTGGTAGGTTTGATGGAACCTCTGAGTATAAGCTTGACAAGCAAGGCAAAATTTTTGAGCACAGGGTTGACAACATTGCTCTGAATTCACCTCCTAGGTTTAAAGTGCTGGGTGTGGAAGAATTAATTCAATCCATTGGTTGCCCCTCGACCCCAAAACCAACTTACTTTGAAATATCTTCATCTACTAAGAGAACGGAATGTTAG 771 0.4319 MALLVPSPETYVAPQIALNPNPNLSKFHSFKPYTKGKAIGSKRGMKISCKVKDFAVLDLSLDQNVKSYGQFSVPVKQGSRQSKEEEEEKQNFYVNLGYAIRTLREEFPDLFYRELSFDIYRDDIVFKDPLNTFIGVKNYKSIFWALRFHGRMLFKALWVELSSVWQPVENVIMVRWTVHGIPRVPWESRGRFDGTSEYKLDKQGKIFEHRVDNIALNSPPRFKVLGVEELIQSIGCPSTPKPTYFEISSSTKRTEC* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01564 256 Pfam Uncharacterized conserved protein (DUF2358) 99 209 IPR018790 -
Rops4g01564 256 PANTHER RIKEN CDNA 2310061I04 GENE 61 245 IPR018790 -
Rops4g01564 256 SUPERFAMILY NTF2-like 115 211 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01564 Rops-Chr4 38727924 38730227 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01564 - - gmx:100792423 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01564 4 38727924 38730227 Rops4g01564 4 38727924 38730227 ECH