Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01563 ATGTCTTCAATTTCCTCATGTTCCTTCCGATTGGTCACAACCAGAATCCCACTTTCCCTCTTTGATAAAAACCCACTTTCCAAAACCTCAACTTTCTTCATAACACCATCAAAACCATTTTTCTCCTTCAAACCCATCACCTTCCAGAGACTTCCAACAAAGCCCTCAGCATCATCATCACCATCAGCATCATCATCTTCCACATCCCTTCAACCCATCGAAGAGCTTCCCCCAAAGCTTCAAGAAATCGTGAAGCTCTTCCAATCCGTTCAGGAACCAAAAGCCAAATACGAACAGCTTCTCTTCTACGGCAAGAACCTCAAACCCCTCGATGAACAATTCAAGAACAAGGAGAACAAGGTCGAAGGTTGTGTTTCCCAGGTTTGGGTCCGAGCCTACCTCGATGATGACAAGAATGTCGTCTATGAAGCTGACTCTGATTCCATTCTCACTAAGGGTCTCGCTGCTTTGCTCGTTCAAGGGTTTTCGGGTCGACCCGTTAAGGAGATTATTCGGGTCTCACCCGATTTTGTAGTGCTTCTCGGGTTGCAGCAGAGTTTAACACCTTCAAGGAATAATGGGTTCTTGAATATGCTTAAATTGATGCAGAAAAAGGCACTTGTGCTTTATGTGGAAGCTGAAAAAGGTGCTGAATTGAGCTCAAATTCAAGTTCTGAGTTGAAAGGTGATAACTTTGGTGACAATTCAAGTGTTGGACACAGTTCTGAAATTGATAATCCATCATCATCATCACCCAGTTCAGATGCTGAACTTATTGATAAGAATATAGACTTGGGTGGTAGAGGAAGGAGGATTAAGGAGAAGCTGGAAAAGGAGCTTGATCCTATTGAGTTGCATGTTGAAGATGTTTCTTATCAACATGCGGGGCATGCAGGTGTTAGAGGGAGTAATGGTGAGACACATTTCAATCTTAAAGTGGTATCTAAAGAGTTTGAAGGGAAGAGTTTAGTTAAGAGGCATAGGCTTATCTATAACCTGTTGCAAGAGGAGTTGCAGTCTGGATTGCATGCCTTGTCAATTGTGGCAAAGACGCCTTCTGAAGTCAATGAATGA 1074 0.4292 MSSISSCSFRLVTTRIPLSLFDKNPLSKTSTFFITPSKPFFSFKPITFQRLPTKPSASSSPSASSSSTSLQPIEELPPKLQEIVKLFQSVQEPKAKYEQLLFYGKNLKPLDEQFKNKENKVEGCVSQVWVRAYLDDDKNVVYEADSDSILTKGLAALLVQGFSGRPVKEIIRVSPDFVVLLGLQQSLTPSRNNGFLNMLKLMQKKALVLYVEAEKGAELSSNSSSELKGDNFGDNSSVGHSSEIDNPSSSSPSSDAELIDKNIDLGGRGRRIKEKLEKELDPIELHVEDVSYQHAGHAGVRGSNGETHFNLKVVSKEFEGKSLVKRHRLIYNLLQEELQSGLHALSIVAKTPSEVNE* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01563 357 MobiDBLite consensus disorder prediction 220 257 - -
Rops4g01563 357 Gene3D - 76 216 - -
Rops4g01563 357 Pfam BolA-like protein 276 354 IPR002634 -
Rops4g01563 357 SUPERFAMILY BolA-like 270 356 IPR036065 -
Rops4g01563 357 Pfam Fe-S metabolism associated domain 85 204 IPR003808 -
Rops4g01563 357 FunFam SufE-like protein, chloroplastic 266 357 - -
Rops4g01563 357 PANTHER - 69 356 - -
Rops4g01563 357 MobiDBLite consensus disorder prediction 220 260 - -
Rops4g01563 357 MobiDBLite consensus disorder prediction 52 71 - -
Rops4g01563 357 SUPERFAMILY SufE/NifU 74 206 - -
Rops4g01563 357 Gene3D - 266 355 IPR036065 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01563 Rops-Chr4 38725451 38726782 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01563 K22066 - gmx:100779254 473.781