Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01558 ATGTCCAAGTTCTTCTTCAGATCATTTATTGGTGCTGAGTCATTTTACACCCATTTGAATCCTGAGGGCACAAATGGGAATCAAAATGGAGGGATAATAACTGTGAAAATTGTAATTCAGAAGATTCAAAAGGAACTTGACAAACTGAGGGAAACAGAACAGGATCCATCATCATCACCAAAATCTGTATTGGAACAAGGTGCTTTTCTTGCTGACATATTAGGACTTCTTGAGTCAGTGGCAACATCTCATCCACATGGTGAAGGGAATAATAATCAGCAAAATGGTAGTTTCACCTTTCATCCACTGATGAAAGAAAAGAAACAATCTGATGAACCTGCTGATTACTTTCTGAGAGAAGAGATTCGCAAGTATGTCAAGATCAAGCCAAACAGATTAGGAAAACAAAACTTCATGGGGGCAAATGCAACCTTCACCAGCATAGGACATGCATGCTTTGCCATGAAGGAAGAGCTAGAAGAGTACATGGATTATGACATTGGTGAAATGTGCAATGATGATTGGAAACTAGCTCAAAGGCTTATGGTTCATGGATGTGATCCTCTACCAAGGAGAAGGTGCTTTTCAAGAGCCCCCAAGCTATACAACAAACCATTCCCCATCAATGAGTCCATGTGGAAACTCCCTGATGACAGAAATGTTAGATGGAGTGAATACAGGTGCAAGAACTTTACTTGTCTTGCAAGCAACACCACTCATAAGGGATTCTTCAAGTGTGCAGATTGCTTCAATCTCATTGATCATGAGATGCCAAGATGGGTAAGATTGGAGGCTGATTCAAACAACACAGCTGATTTTCTTATATCTGAGGTTCTTGGAATCAAGCCAGGGGAGATCAGAATAGGATTGGATTTCAGTGTTGGAACTGGGACTTTTGCTGCTAGGATGAGGGAGTTCAATGTGACAATTGTTTCAGCAACTATCAACTTTGGGGCACCCTTCAGTGAAATGATAGCTCTTAGAGGACTTGTTCCTCTCTACTTGACCATAAATCAAAGGCTTCCATTTTTTGACAACACCCTTGATTTGATTCACACAACAAGATTTCTAGATGGGTGGATTGATTTTGTGCTCTTGGACTTTGTATTGTTTGATTTGGATAGAATTTTGAGGCCAGGGGGGTTGTTATGGATTGACAGTTTTTTCTGCTTGAAGGAAGATTTGTATGATTACTTGCAAGCCTTTGAAATGCTGAGATATAGGAAACACAAATGGGTTGTTGTTCCGAAGCTTGATAAGGATGATCAAGAGGTGTTCTTTTCTGCTGTTTTAGAGAAGCCTCCTAGGCCATTCCGGTGA 1320 0.4045 MSKFFFRSFIGAESFYTHLNPEGTNGNQNGGIITVKIVIQKIQKELDKLRETEQDPSSSPKSVLEQGAFLADILGLLESVATSHPHGEGNNNQQNGSFTFHPLMKEKKQSDEPADYFLREEIRKYVKIKPNRLGKQNFMGANATFTSIGHACFAMKEELEEYMDYDIGEMCNDDWKLAQRLMVHGCDPLPRRRCFSRAPKLYNKPFPINESMWKLPDDRNVRWSEYRCKNFTCLASNTTHKGFFKCADCFNLIDHEMPRWVRLEADSNNTADFLISEVLGIKPGEIRIGLDFSVGTGTFAARMREFNVTIVSATINFGAPFSEMIALRGLVPLYLTINQRLPFFDNTLDLIHTTRFLDGWIDFVLLDFVLFDLDRILRPGGLLWIDSFFCLKEDLYDYLQAFEMLRYRKHKWVVVPKLDKDDQEVFFSAVLEKPPRPFR* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01558 439 Gene3D Vaccinia Virus protein VP39 259 416 IPR029063 -
Rops4g01558 439 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 258 413 IPR029063 -
Rops4g01558 439 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 280 386 IPR004159 GO:0008168
Rops4g01558 439 Coils Coil 32 55 - -
Rops4g01558 439 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 32 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01558 Rops-Chr4 38675485 38676804 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01558 - - gmx:100809058 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01558 4 38675485 38676804 Rops4g01558 4 38675485 38676804 ECH