Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01555 ATGGCAGAGAAGGAGCAAGTTAGACCCCTAGCCCCAGTAATAGACCGTCCATTGAGCAACGAGGATGGCACCCCTTTGCACCTCCAAAATCATGGTCGTAGAAAATTCATCAAACGGTGTGCTTACCCCTTAGCTTTCTTACTACTTCTAGCAATAGTAATCATAGTTCTAATATTCACTGTATTTCGTATTAAGGACCCCATAATCAAAATGAATGGTGTCAAAGTCACAAAACTCGAACTTGTCAATAGTATGACACCTAAATCTGGGGTTAACATGTCCTTAATTGCAGATGTATCAGTGAAAAATCCAAATGTTGCATCTTTTAAGTATAGTAACACCACCACAACTTTGTACTATCATGGCATCATGGTTGGAGAGGCAAGAGGACCACCTGGGAGGGCCAAGGCAAGGAAAACAATAAGGATGAATGTCACAGTTGATGTCATCACAGAAAGAATCATGTCTAGTCCGTATTTGACAACAGATTTGGGTTCAGGGTTGTTGACTATGAACAGTTTCTCAAGAGTTCCAGGGCAAGTGAAGATATTGAACTTGTTTAAGAAACATGTTGTTGTGAAAATGAACTGCACCACCACTTTCAATATTTCTAGCAGGGGTATTGAAGAGCAGGATTGTAAGCGGAAGGTTAAAATTTGA 660 0.403 MAEKEQVRPLAPVIDRPLSNEDGTPLHLQNHGRRKFIKRCAYPLAFLLLLAIVIIVLIFTVFRIKDPIIKMNGVKVTKLELVNSMTPKSGVNMSLIADVSVKNPNVASFKYSNTTTTLYYHGIMVGEARGPPGRAKARKTIRMNVTVDVITERIMSSPYLTTDLGSGLLTMNSFSRVPGQVKILNLFKKHVVVKMNCTTTFNISSRGIEEQDCKRKVKI* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01555 219 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 33 213 - -
Rops4g01555 219 SUPERFAMILY LEA14-like 49 156 - -
Rops4g01555 219 Gene3D - 53 204 - -
Rops4g01555 219 Pfam Late embryogenesis abundant protein 99 198 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01555 Rops-Chr4 38660634 38661383 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01555 - - gmx:100799820 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01555 4 38660634 38661383 Rops4g01555 4 38660634 38661383 ECH