Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01494 ATGACCAAGGGCAATAACGAGAATTTCCAAGGGCAAGTCGGTAATTTAATGTGGCAGAACCAACATTTAAAACTGAACGTTCCCCCAACCCTCTCCTCTAAGACAGAGTGCACAACTGTCACACTCCGTAACAGAAAAATGGCAACGGCGAAACCGAAACGTAACAATTTCCCGCCGATAACAGAATGCAACGGAACGACGTCGTCTTCCCCGCGTGAGTCCATCGCCGCCGACCTCGACGGCACTCTTCTCATCTCCCGAAGCTCCTTCCCTTACTTCATGCTCGTCGCCGTCGAAGCCGGTAGCCTCCTCCGTGGCCTCATCCTCCTCCTTTCCCTTCCCTTCGTCATCGTTGCTTATCTTTTCATCTCAGAATCGCTCGGAATTCAGATCCTCATCTTCATCTCCTTCTCCGGTCTCAAAATCCGCGATATAGAACTCGCTTCACGCGCTGTTCTCCCTAGGTTTTATGCTGCGGATGTGAGGAAGGAGAGTTTTGAGATGTTTGACAAGTGCAAGAGGAAGGTTGTGGTGACCGCGAATCCGACGGTGATGGTGGAGACGTTTGTGAAGGACTTTCTCGGTGGAGACAAGGTGCTTGGAACGGAGATCGAGGTGAATCCGAAGACGAAGAAGGCTACGGGGTTCGTGAAGAAGCCTGGTGTGTTGGTCGGAAAGTTGAAGCGTTTGGCTATTTTGAAAGAGTTTGGTGATGATTTACCTGATATCGGCCTCGGAGATCGTCACACCGATCATGATTTCATGTCTATTTGCAAGGAGGGTTACATGGTGCTACCCAGCAAATCAGCAAAACCAGTCCCACAAGAGCGTCTCAAGAGCAGGCTCATCTTCCATGACGGCCGTTTCGTGCAGCGACCAGACCCATTGAATGCCATCATCACCTTCACATGGCTCCCCTTTGGCTTCATCCTCTCCCTAATCAGGGTCTACTTCAACCTCCCTCTCCCAGAACGCATCGTCCGTTACACCTATGAAATGCTTGGCATCAAGCTTATCATCCGGGGCCACCGTCCTCCGCCACCATCTCCGGGCACCCCTGGCAACCTCTATGTCTGCAACCACCGCAGCGCCCTCGACCCCATCGTCATCGCCATAGCCCTCGGCCGCAAAGTCTCCTGCGTCACCTACAGCGTTAGCAAACTCTCCCGCTTCCTTTCTCCAATCCCAGCTGTCGCCCTCACCCGCGACCGCGCCGCCGACGCCGCTCGCATCAGGGAGCTCCTCCAGAAGGGTGATCTGGTGGTGTGCCCCGAAGGCACCACGTGTCGTGAGCCCTTCTTGCTGCGGTTCAGTGCTCTGTTCGCTGAGCTTAGCGATAGGATCGTGCCGGTGGCTGTTGATTGCAAGCAGAGGATGTTCTTTGGGACCACCGTTCGTGGGGTCAAGTTCTGGGACCCTTACTTCTTCTTCATGAATCCTAGGCCTGTTTACGAGGTTACCTTCCTTGACCGGTTGCCGGAGGAGATGTCGTGCAAGGCTGGTGGGAAGTCTTCGATTGAGGTGGCGAATCACGTGCAGAAGGTGTTGGGGGATGTGCTTGGGTTTGAGTGCACAGGGTTGACTAGGAAAGATAAGTACCTGTTGCTTGGTGGGAATGATGGGAAGGTGGAGTCCATGTACAGTGCCAATAAGTGA 1656 0.5368 MTKGNNENFQGQVGNLMWQNQHLKLNVPPTLSSKTECTTVTLRNRKMATAKPKRNNFPPITECNGTTSSSPRESIAADLDGTLLISRSSFPYFMLVAVEAGSLLRGLILLLSLPFVIVAYLFISESLGIQILIFISFSGLKIRDIELASRAVLPRFYAADVRKESFEMFDKCKRKVVVTANPTVMVETFVKDFLGGDKVLGTEIEVNPKTKKATGFVKKPGVLVGKLKRLAILKEFGDDLPDIGLGDRHTDHDFMSICKEGYMVLPSKSAKPVPQERLKSRLIFHDGRFVQRPDPLNAIITFTWLPFGFILSLIRVYFNLPLPERIVRYTYEMLGIKLIIRGHRPPPPSPGTPGNLYVCNHRSALDPIVIAIALGRKVSCVTYSVSKLSRFLSPIPAVALTRDRAADAARIRELLQKGDLVVCPEGTTCREPFLLRFSALFAELSDRIVPVAVDCKQRMFFGTTVRGVKFWDPYFFFMNPRPVYEVTFLDRLPEEMSCKAGGKSSIEVANHVQKVLGDVLGFECTGLTRKDKYLLLGGNDGKVESMYSANK* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01494 551 Pfam haloacid dehalogenase-like hydrolase 76 255 - -
Rops4g01494 551 MobiDBLite consensus disorder prediction 51 72 - -
Rops4g01494 551 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 262 541 - -
Rops4g01494 551 CDD LPLAT 356 489 - -
Rops4g01494 551 PANTHER ANCIENT UBIQUITOUS PROTEIN 73 545 - -
Rops4g01494 551 SMART plsc_2 355 456 IPR002123 GO:0016746
Rops4g01494 551 FunFam Glycerol-3-phosphate 2-O-acyltransferase 6 157 276 - -
Rops4g01494 551 Pfam Acyltransferase 354 444 IPR002123 GO:0016746
Rops4g01494 551 Gene3D - 155 279 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01494 Rops-Chr4 37739648 37744080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01494 53 551 Acyl Lipid Metabolism Gene Families AT4G00400 81.563 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01494 K13508 - gmx:100794137 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01494 4 37739648 37744080 Rops4g01494 4 37739648 37744080 ECH